RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 MMD2Q8IY49 270 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 CLDN23Q96B33 292 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 NKX2-8O15522 239 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PTGDSP41222 190 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MESP2Q0VG99 397 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PYCR3Q53H96 274 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF813Q6ZN06 617 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 BVESQ8NE79 360 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR10G3Q8NGC4 313 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ST20Q9HBF5 79 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PARD6AQ9NPB6 346 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 CSAG2Q9Y5P2 127 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 H3BMM0 161 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 GFYI3L273 518 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 NME2P1O60361 137 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF253O75346 499 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 RHBDL1O75783 438 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MPC2O95563 127 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PAX1P15863 534 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FSTP19883 344 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OTOSQ8NHW6 89 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MRGPRDQ8TDS7 321 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MCHR2Q969V1 340 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 SLX1AQ9BQ83 275 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 POM121BA6NF01 834 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 RBFOX3A6NFN3 312 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 HIST1H1DP16402 221 aaKnown RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 COL8A1P27658 744 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PSMB2P49721 201 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PIN1Q13526 163 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM249Q2WGJ8 235 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 C10orf126Q8N4M7 172 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM86BQ8N661 226 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR1L8Q8NGR8 309 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FAM57AQ8TBR7 257 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF480Q8WV37 535 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MS4A6AQ9H2W1 248 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZFP64Q9NPA5 681 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PRDM7Q9NQW5 492 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 IGSF5Q9NSI5 407 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 NTNG1Q9Y2I2 539 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 A0A0G2JLM5 398 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 A0A1B0GUS0 222 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FXYD4P59646 89 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 SLCO4C1Q6ZQN7 724 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF551Q7Z340 670 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 BIVMQ86UB2 503 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 BATF2Q8N1L9 274 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR2G2Q8NGZ5 317 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR6X1Q8NH79 312 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR2V1Q8NHB1 315 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 IL1F10Q8WWZ1 152 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FAM71F1Q96KD3 344 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 SORT1Q99523 831 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 AUNIPQ9H7T9 357 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 COA4Q9NYJ1 87 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PSENENQ9NZ42 101 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 GPR52Q9Y2T5 361 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF98A6NK75 572 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 B9A039 149 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 K7ENP7 123 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 M0R3E3 92 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 LEPROTL1O95214 131 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 HOXB5P09067 269 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 CD68P34810 354 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MAS1LP35410 378 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 INO80CQ6PI98 192 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR51H1Q8NH63 302 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FBXO27Q8NI29 283 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PLPPR2Q96GM1 343 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 TSPAN32Q96QS1 320 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PLA2G2FQ9BZM2 168 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PRSS50Q9UI38 385 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR2W1Q9Y3N9 320 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF593O00488 134 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PRR35P0CG20 571 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FCER1GP30273 86 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 AQP10Q96PS8 301 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 OR8B4Q96RC9 309 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PBOV1Q9GZY1 135 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 EML6Q6ZMW3 1958 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF729A6NN14 1252 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 PITX3O75364 302 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 KBTBD11O94819 623 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 IL4P05112 153 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ACYP1P07311 99 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 APOBEC3AP31941 199 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 FCGR2BP31994 310 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 GPR183P32249 361 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 DMRTC1Q5HYR2 192 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 IL17RELQ6ZVW7 336 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 RTN4RL2Q86UN3 420 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ASB10Q8WXI3 467 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM230Q96A57 120 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ST6GALNAC5Q9BVH7 336 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 C11orf54Q9H0W9 315 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ISG20L2Q9H9L3 353 aaKnown RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 IL21Q9HBE4 155 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 GPR84Q9NQS5 396 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 NHP2Q9NX24 153 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms