RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZNF525Q8N782 197 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 OR2Y1Q8NGV0 311 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
PCDH8-201ENST00000338862 VN1R17PQ8TDU5 208 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 TMEM56Q96MV1 263 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 TMEM56-RWDD3S4R434 201 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 PINLYPA6NC86 204 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 F6UZH7 168 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 PMCHP20382 165 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 CDC34P49427 236 aaPredicted RBP12.02□□□□□ -0.49
PCDH8-201ENST00000338862 PAX9P55771 341 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 SLC10A1Q14973 349 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 CEACAM21Q3KPI0 293 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 NMSQ5H8A3 153 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 LRTM2Q8N967 370 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 DEFB108BQ8NET1 73 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 DTD1Q8TEA8 209 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 DERL1Q9BUN8 251 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 DEPPQ9NTK1 212 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 RPH3ALQ9UNE2 315 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 NUP210LQ5VU65 1888 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 A6NNC1 897 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 CATR1Q13166 79 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 NEIL1Q96FI4 390 aaPredicted RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 UBE2ZQ9H832 354 aaPredicted RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 LTBP2Q14767 1821 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 CACNA1BQ00975 2339 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 B4DEV8 164 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 S1PR2O95136 353 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 OR2H2O95918 312 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 OTX1P32242 354 aaPredicted RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 ATP5G3P48201 142 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 RPL23P62829 140 aaKnown RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 SSC4DQ8WTU2 575 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 GALMQ96C23 342 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 DCTN5Q9BTE1 182 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 TWSG1Q9GZX9 223 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 IGLV3-19P01714 112 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 OR8B8Q15620 311 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 DCAF12Q5T6F0 453 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 NUFIP2Q7Z417 695 aaKnown RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 TMEM183AQ8IXX5 376 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 SPEM1Q8N4L4 309 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 DRAM1Q8N682 238 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 OR4A16Q8NH70 328 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
PCDH8-201ENST00000338862 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 ABI3Q9P2A4 366 aa12.01□□□□□ -0.49
PCDH8-201ENST00000338862 SH2D1BO14796 132 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 TGOLN2O43493 480 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 C1QTNF9P0C862 333 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 GNB2P62879 340 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 IQCJQ1A5X6 159 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 ACSM6Q6P461 480 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 TMEM256Q8N2U0 113 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 TP53TG5Q9Y2B4 290 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 SPTAN1Q13813 2472 aaKnown RBP12□□□□□ -0.49
PCDH8-201ENST00000338862 IGLV3-12A0A075B6K2 115 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 NAPSAO96009 420 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 DBX2Q6ZNG2 339 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 KCNE4Q8WWG9 221 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 H0Y8G0 127 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 SLC17A3O00476 420 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 EREGO14944 169 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 AGFG2O95081 481 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 MT-CO3P00414 261 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 GZMBP10144 247 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 PLPPR1Q8TBJ4 325 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 SF3B5Q9BWJ5 86 aaKnown RBP12□□□□□ -0.49
PCDH8-201ENST00000338862 ENY2Q9NPA8 101 aa12□□□□□ -0.49
PCDH8-201ENST00000338862 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 TIMM8AO60220 97 aaPredicted RBP11.99□□□□□ -0.49
PCDH8-201ENST00000338862 GZMHP20718 246 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 CBLN1P23435 193 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 MRPL49Q13405 166 aaKnown RBP11.99□□□□□ -0.49
PCDH8-201ENST00000338862 C1QL4Q86Z23 238 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 LEAP2Q969E1 77 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 CHRNA10Q9GZZ6 450 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 CNN1P51911 297 aaKnown RBP11.99□□□□□ -0.49
PCDH8-201ENST00000338862 RTL8AQ9BWD3 113 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 A0A087WWC5 75 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 ZNF716A6NP11 495 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 IGKV1D-33P01593 117 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 IGKV1-33P01594 117 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 MBP02144 154 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 IER3P46695 156 aa11.99□□□□□ -0.49
PCDH8-201ENST00000338862 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
PCDH8-201ENST00000338862 C17orf112F2Z3M2 114 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 FCN1O00602 326 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 HRASP01112 189 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 MDP1Q86V88 176 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 MED13Q9UHV7 2174 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 CELA3BP08861 270 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 SSTR5P35346 364 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms