RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 Q8IYB0 196 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 GATAD1Q8WUU5 269 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 LRRC29Q8WV35 223 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 NINJ1Q92982 152 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 RCC1LQ96I51 464 aaKnown RBP12.44□□□□□ -0.42
UBA1-201ENST00000335972 TAAR6Q96RI8 345 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 SLC25A22Q9H936 323 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 LINC00473A8K010 186 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 CEBPZOSA8MTT3 80 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 IGKV1D-33P01593 117 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 IGKV1-33P01594 117 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 ODAMA1E959 279 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 SELLP14151 372 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 B2MP61769 119 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 CLEC12BQ2HXU8 276 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 ACP7Q6ZNF0 438 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 YIF1AO95070 293 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 INO80CQ6PI98 192 aaPredicted RBP12.43□□□□□ -0.42
UBA1-201ENST00000335972 MOB1BQ7L9L4 216 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 ZNF561Q8N587 486 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 EGLN1Q9GZT9 426 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 IFT22Q9H7X7 185 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 WIPI2Q9Y4P8 454 aa12.43□□□□□ -0.42
UBA1-201ENST00000335972 ARFGEF3Q5TH69 2177 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 AGAP20933 346 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 ERVFRD-1P60508 538 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 RHEBQ15382 184 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 CD177Q8N6Q3 437 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 Q8WTZ3 238 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 MMP9P14780 707 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 GCH1P30793 250 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 PDZD11Q5EBL8 140 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
UBA1-201ENST00000335972 SSX3Q99909 188 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
UBA1-201ENST00000335972 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 TNFRSF9Q07011 255 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 TFF3Q07654 80 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 ZNRF1Q8ND25 227 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 IGHV1-18A0A0C4DH31 117 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 FIP1L1Q6UN15 594 aaKnown RBP12.41□□□□□ -0.42
UBA1-201ENST00000335972 ZNF645Q8N7E2 425 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 MUCL1Q96DR8 90 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 RD3LP0DJH9 198 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 CXXC4Q9H2H0 198 aa12.41□□□□□ -0.42
UBA1-201ENST00000335972 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
UBA1-201ENST00000335972 IGHV2OR16-5A0A0B4J2B6 119 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.4□□□□□ -0.42
UBA1-201ENST00000335972 NPIPB11E5RHQ5 1161 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 SOX15O60248 233 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 FOLR2P14207 255 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 CD200P41217 278 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 EDDM3BP56851 147 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 ACSM6Q6P461 480 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 OR5T1Q8NG75 326 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 WDR61Q9GZS3 305 aaKnown RBP12.4□□□□□ -0.42
UBA1-201ENST00000335972 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 M0R1B8 84 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 SPRY3O43610 288 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 IGKV3-15P01624 115 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 OR8U8P0C7N1 319 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 HBG1P69891 147 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 HBG2P69892 147 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 CEP295Q9C0D2 2601 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 CEACAM1P13688 526 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 NDUFA6P56556 154 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
UBA1-201ENST00000335972 LRRC75BQ2VPJ9 315 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 NCR3LG1Q68D85 454 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 DUX4L9Q6RFH8 374 aaPredicted RBP12.4□□□□□ -0.42
UBA1-201ENST00000335972 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
UBA1-201ENST00000335972 NECAP1Q8NC96 275 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 DEFB108BQ8NET1 73 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 TAF15Q92804 592 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBA1-201ENST00000335972 LHX4Q969G2 390 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 GNG12Q9UBI6 72 aa12.4□□□□□ -0.42
UBA1-201ENST00000335972 APC2O95996 2303 aa12.4□□□□□ -0.43
UBA1-201ENST00000335972 TPRP12270 2363 aaKnown RBP12.4□□□□□ -0.43
UBA1-201ENST00000335972 OOEPA6NGQ2 149 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 CYB5BO43169 146 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
UBA1-201ENST00000335972 RPL39P5Q59GN2 51 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 FCGR3BO75015 233 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 IGHG3P01860 377 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 RPUSD4Q96CM3 377 aaKnown RBP12.39□□□□□ -0.43
UBA1-201ENST00000335972 STARD4Q96DR4 205 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 HES4Q9HCC6 221 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
UBA1-201ENST00000335972 BCL2P10415 239 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 GCSAMLQ5JQS6 135 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 FAM90A2PQ658T7 463 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms