RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TMEM17Q86X19 198 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR4C16Q8NGL9 310 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR56B4Q8NH76 319 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 MOB3AQ96BX8 217 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 SLC5A7Q9GZV3 580 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 DPAGT1Q9H3H5 408 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 SDHAF2Q9NX18 166 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 GAB2Q9UQC2 676 aa11.34□□□□□ -0.59
APOBEC3B-202ENST00000335760 BTBD17A6NE02 478 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 M0R1X1 148 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 PROP1O75360 226 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 AMY2AP04746 511 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZNF735P0CB33 412 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 CD24P25063 80 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 DYNLT3P51808 116 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 PPP5CP53041 499 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 HILS1P60008 231 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZNF645Q8N7E2 425 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 CFHR4Q92496 578 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 C5orf30Q96GV9 206 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 DUX5Q96PT3 197 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 JMJD8Q96S16 334 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 NABP2Q9BQ15 211 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 FXYD6Q9H0Q3 95 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 ESM1Q9NQ30 184 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 CCL28Q9NRJ3 127 aa11.33□□□□□ -0.6
APOBEC3B-202ENST00000335760 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 OR5H14A6NHG9 310 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 SLC22A5O76082 557 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 VENTXO95231 258 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 IL7P13232 177 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 LY6EQ16553 131 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 SCGB2B2Q4G0G5 96 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZDHHC22Q8N966 263 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 OR5R1Q8NH85 324 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 CAPSLQ8WWF8 208 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 CCDC32Q9BV29 185 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 HRASLSQ9HDD0 168 aa11.32□□□□□ -0.6
APOBEC3B-202ENST00000335760 A0A0A6YYJ9 748 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 LINC00854A0A1B0GVQ3 168 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 SNRNP70P08621 437 aaKnown RBP11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 CT45A6P0DMU7 189 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 CT45A5P0DMU8 189 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 CT45A7P0DMV0 189 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 CD40LGP29965 261 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 LSAMPQ13449 338 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 AADACL3Q5VUY0 350 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 GLDNQ6ZMI3 551 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 MCUBQ9NWR8 336 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 POMT1Q9Y6A1 747 aa11.31□□□□□ -0.6
APOBEC3B-202ENST00000335760 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 CD1BP29016 333 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 GNRHRP30968 328 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 LINC00205P59089 165 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 SRSF2Q01130 221 aaKnown RBP11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 HES1Q14469 280 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 MSMO1Q15800 293 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 LPCAT3Q6P1A2 487 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 LHFPL1Q86WI0 220 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 OR51S1Q8NGJ8 323 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 TERB2Q8NHR7 220 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 RBMXL1Q96E39 390 aaKnown RBP11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
APOBEC3B-202ENST00000335760 A6NDX4 124 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 FAM90A9PA6NNJ1 464 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 CLDN34H7C241 214 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 TNFSF12O43508 249 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 PGAM2P15259 253 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 DUTP33316 252 aaKnown RBP11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 THBS3P49746 956 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 UCP3P55916 312 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 HNF4GQ14541 408 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 TMEM219Q86XT9 240 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 THNSL2Q86YJ6 484 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZNF383Q8NA42 475 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZBTB34Q8NCN2 500 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 DEDD2Q8WXF8 326 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms