RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 RPS19BP1Q86WX3 136 aaKnown RBP12.22□□□□□ -0.45
SNX20-202ENST00000330943 IMMP1LQ96LU5 166 aa12.22□□□□□ -0.45
SNX20-202ENST00000330943 TRAPPC1Q9Y5R8 145 aa12.22□□□□□ -0.45
SNX20-202ENST00000330943 SPENQ96T58 3664 aaKnown RBP12.21□□□□□ -0.45
SNX20-202ENST00000330943 KIR2DL5BA0A0G2JN68 375 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 KIR2DL5BA0A0G2JPC4 375 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 ZNF705FA8MVS1 300 aaPredicted RBP12.21□□□□□ -0.45
SNX20-202ENST00000330943 ZNF705DP0CH99 300 aaPredicted RBP12.21□□□□□ -0.45
SNX20-202ENST00000330943 ZNF705BP0CI00 300 aaPredicted RBP12.21□□□□□ -0.45
SNX20-202ENST00000330943 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 BTNL3Q6UXE8 466 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 KIR2DL5AQ8N109 375 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 SH2D2AQ9NP31 389 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 NCKAP5O14513 1909 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 LOC102723996A0A087X1L8 192 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 TRBV6-6A0A0A6YYG2 114 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 TRAPPC6AO75865 159 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 UMODP07911 640 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 PPP1CBP62140 327 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 TFF3Q07654 80 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 WIPI1Q5MNZ9 446 aaPredicted RBP12.21□□□□□ -0.45
SNX20-202ENST00000330943 FGFRL1Q8N441 504 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 MS4A10Q96PG2 267 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 STRADBQ9C0K7 418 aa12.21□□□□□ -0.45
SNX20-202ENST00000330943 CEP250Q9BV73 2442 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 TMEM210A6NLX4 147 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 C11orf94C9JXX5 98 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 NUPR1O60356 82 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 VENTXO95231 258 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 RFPL3SP0C7P2 107 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 RAB4AP20338 218 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 NPPCP23582 126 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 SRD5A2P31213 254 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 MPLP40238 635 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 ZNF705AQ6ZN79 300 aaPredicted RBP12.21□□□□□ -0.46
SNX20-202ENST00000330943 RBM14Q96PK6 669 aaKnown RBP12.21□□□□□ -0.46
SNX20-202ENST00000330943 PCED1AQ9H1Q7 454 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 CLN8Q9UBY8 286 aa12.21□□□□□ -0.46
SNX20-202ENST00000330943 DOCK11Q5JSL3 2073 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 FREM1Q5H8C1 2179 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 LILRA1O75019 489 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 NGFP01138 241 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 CRYAAP02489 173 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 GCH1P30793 250 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 LCN2P80188 198 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 ARF1P84077 181 aaKnown RBP12.2□□□□□ -0.46
SNX20-202ENST00000330943 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 KCNE4Q8WWG9 221 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 HLA-CQ95604 372 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 TMEM147Q9BVK8 224 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 MBP02144 154 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 WNT2P09544 360 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 COX5AP20674 150 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 OR10J1P30954 320 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 RPL15P61313 204 aaKnown RBP12.2□□□□□ -0.46
SNX20-202ENST00000330943 IGFBP7Q16270 282 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 OR5A2Q8NGI9 324 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 SDSLQ96GA7 329 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 TBX15Q96SF7 602 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 IL17BQ9UHF5 180 aa12.2□□□□□ -0.46
SNX20-202ENST00000330943 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.19□□□□□ -0.46
SNX20-202ENST00000330943 CFIP05156 583 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 CD33P20138 364 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 LINC01551Q86U37 167 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 DRAM1Q8N682 238 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 PRRG4Q9BZD6 226 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 COLQQ9Y215 455 aaPredicted RBP12.19□□□□□ -0.46
SNX20-202ENST00000330943 TNRC6BQ9UPQ9 1833 aaKnown RBP12.19□□□□□ -0.46
SNX20-202ENST00000330943 A6NNC1 897 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 KRASP01116 189 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 UBE2G2P60604 165 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 R3HDM4Q96D70 268 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 WDR54Q9H977 334 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 DCAF16Q9NXF7 216 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 TRAPPC2LQ9UL33 140 aa12.19□□□□□ -0.46
SNX20-202ENST00000330943 PGPEP1LA6NFU8 196 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 RHBDL1O75783 438 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 P04436 131 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 CXCL12P48061 93 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 TCF23Q7RTU1 214 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 ZNF709Q8N972 641 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 MAFAQ8NHW3 353 aaPredicted RBP12.18□□□□□ -0.46
SNX20-202ENST00000330943 OR5P3Q8WZ94 311 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 WDYHV1Q96HA8 205 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 SIRPB1O00241 398 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 MLNRO43193 412 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 C1QTNF9P0C862 333 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 G6PCP35575 357 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 MLF1P58340 268 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 APOBEC3DQ96AK3 386 aaPredicted RBP12.18□□□□□ -0.46
SNX20-202ENST00000330943 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 PXMP4Q9Y6I8 212 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 MGAQ8IWI9 3026 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 ESPL1Q14674 2120 aa12.18□□□□□ -0.46
SNX20-202ENST00000330943 SVILO95425 2214 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms