RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 ZNF506Q5JVG8 444 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 MIC13Q5XKP0 118 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 HCP5Q6MZN7 132 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 SH3BGRL3Q9H299 93 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 ERVH48-1M5A8F1 160 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 PRSS2P07478 247 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 LINC00869P0C866 280 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
FNDC1-202ENST00000329629 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.45
FNDC1-202ENST00000329629 A0A0B4J293 547 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 GRIFINA4D1Z8 144 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 PRDX2P32119 198 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 RBFOX2O43251 390 aaKnown RBP eCLIP12.21□□□□□ -0.45
FNDC1-202ENST00000329629 SCTP09683 121 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 NPBWR2P48146 333 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 TUBD1Q9UJT1 453 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
FNDC1-202ENST00000329629 DLEC1Q9Y238 1755 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
FNDC1-202ENST00000329629 DTX4Q9Y2E6 619 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 SCN1AP35498 2009 aa12.21□□□□□ -0.45
FNDC1-202ENST00000329629 H0Y980 276 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 C1QCP02747 245 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 FOLR2P14207 255 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 OIT3Q8WWZ8 545 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 ZNF385AQ96PM9 386 aaKnown RBP12.21□□□□□ -0.46
FNDC1-202ENST00000329629 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 K7N7A8 449 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 LDLRAD4O15165 306 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 TMEM177Q53S58 311 aa12.21□□□□□ -0.46
FNDC1-202ENST00000329629 NUP205Q92621 2012 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 TSPAN2O60636 221 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 CXorf66Q5JRM2 361 aaPredicted RBP12.2□□□□□ -0.46
FNDC1-202ENST00000329629 EBLN2Q6P2I7 272 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 ZNF645Q8N7E2 425 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 METTL26Q96S19 204 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 HLA-DQA1P01909 254 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 GGTLC2Q14390 218 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 DCAF10Q5QP82 559 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 SS18L1O75177 396 aaPredicted RBP12.2□□□□□ -0.46
FNDC1-202ENST00000329629 DLX6P56179 175 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 OR52M1Q8NGK5 317 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 PRDM14Q9GZV8 571 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 ALX4Q9H161 411 aaPredicted RBP12.2□□□□□ -0.46
FNDC1-202ENST00000329629 A0A1W2PP11 408 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 B4E171 279 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 TSPAN7P41732 249 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 RPL31P62899 125 aaKnown RBP12.2□□□□□ -0.46
FNDC1-202ENST00000329629 GAB4Q2WGN9 574 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 ZNF600Q6ZNG1 722 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 CCL13Q99616 98 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 WDR54Q9H977 334 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 ARL14EPLP0DKL9 152 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 C9orf40Q8IXQ3 194 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 LINC00518Q8N0U6 118 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 OR4A5Q8NH83 315 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 TMEM45BQ96B21 275 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 SCNM1Q9BWG6 230 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 CCL27Q9Y4X3 112 aa12.2□□□□□ -0.46
FNDC1-202ENST00000329629 CFDP00746 253 aaPredicted RBP12.19□□□□□ -0.46
FNDC1-202ENST00000329629 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
FNDC1-202ENST00000329629 GAPDHP04406 335 aaKnown RBP12.19□□□□□ -0.46
FNDC1-202ENST00000329629 RRN3P1Q2M238 152 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 SGK494Q96LW2 274 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 ZNF714Q96N38 554 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 WNT5BQ9H1J7 359 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 NPIPB6E9PJ23 425 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 CCL21O00585 134 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 SLC25A17O43808 307 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 FCARP24071 287 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 TRBV5-3A0A0A0MS03 114 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 CA11O75493 328 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 LIFP15018 202 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 ANOS1P23352 680 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 TMEM222Q9H0R3 208 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
FNDC1-202ENST00000329629 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 AGAP20933 346 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 VAX1Q5SQQ9 334 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 TAF15Q92804 592 aaKnown RBP eCLIP12.19□□□□□ -0.46
FNDC1-202ENST00000329629 MOB4Q9Y3A3 225 aa12.19□□□□□ -0.46
FNDC1-202ENST00000329629 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
FNDC1-202ENST00000329629 RPL27AP46776 148 aaKnown RBP12.18□□□□□ -0.46
FNDC1-202ENST00000329629 P2RY4P51582 365 aa12.18□□□□□ -0.46
FNDC1-202ENST00000329629 ARF6P62330 175 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms