RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ZDHHC16Q969W1 377 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 GNB2P62879 340 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 ZNF345Q14585 488 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 ZNF429Q86V71 674 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 MRPL30Q8TCC3 161 aaKnown RBP13.55□□□□□ -0.24
SYNM-201ENST00000328642 TIMD4Q96H15 378 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 RARRES2Q99969 163 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 SLC25A10Q9UBX3 287 aaPredicted RBP13.55□□□□□ -0.24
SYNM-201ENST00000328642 NPTNQ9Y639 398 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 A0A1W2PPE2 198 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 NCBP2LA6PVI3 153 aaKnown RBP13.55□□□□□ -0.24
SYNM-201ENST00000328642 KIAA1324LA8MWY0 1029 aaPredicted RBP13.55□□□□□ -0.24
SYNM-201ENST00000328642 CD8AP01732 235 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 ERVFRD-1P60508 538 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 LY6DQ14210 128 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 LHFPL5Q8TAF8 219 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 OR51I2Q9H344 312 aa13.55□□□□□ -0.24
SYNM-201ENST00000328642 CISD1Q9NZ45 108 aaKnown RBP13.55□□□□□ -0.24
SYNM-201ENST00000328642 hCG_1809904A0A1W2PP81 198 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 A0A1W2PR64 198 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 A0A1W2PRV1 198 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 NPBWR1P48145 328 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 DVL1P1P54792 670 aaPredicted RBP13.54□□□□□ -0.24
SYNM-201ENST00000328642 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
SYNM-201ENST00000328642 ABHD12Q8N2K0 398 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 NTNG2Q96CW9 530 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 PKIBQ9C010 78 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 CEP192Q8TEP8 1941 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 RTP5Q14D33 572 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 AWAT1Q58HT5 328 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 ACSM6Q6P461 480 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 OR10G4Q8NGN3 311 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 ACTR3CQ9C0K3 210 aaPredicted RBP13.54□□□□□ -0.24
SYNM-201ENST00000328642 ZNF665Q9H7R5 613 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 MRPS18CQ9Y3D5 142 aaKnown RBP13.54□□□□□ -0.24
SYNM-201ENST00000328642 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 IGSF23A1L1A6 192 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 C17orf98A8MV24 154 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 ETV2O00321 342 aaPredicted RBP13.54□□□□□ -0.24
SYNM-201ENST00000328642 DVL1O14640 695 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 PRR27Q6MZM9 219 aa13.54□□□□□ -0.24
SYNM-201ENST00000328642 TMEM210A6NLX4 147 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 MGST3O14880 152 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 BTNL8Q6UX41 500 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 LFNGQ8NES3 379 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 TPPP3Q9BW30 176 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 LIME1Q9H400 295 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 IGHV1-18A0A0C4DH31 117 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 PLXNB1O43157 2135 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 NCR3LG1Q68D85 454 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 OR4C12Q96R67 309 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 PPIAL4EA0A075B759 164 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 ARPC4-TTLL3A0A0A6YYG9 625 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 PPIAL4DF5H284 164 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 PPIAL4FP0DN26 164 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 OPRK1P41145 380 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 SPACA3Q8IXA5 215 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 STARD4Q96DR4 205 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 CIB3Q96Q77 187 aaPredicted RBP13.53□□□□□ -0.24
SYNM-201ENST00000328642 PPIAL4AQ9Y536 164 aa13.53□□□□□ -0.24
SYNM-201ENST00000328642 FREM2Q5SZK8 3169 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 A0A1W2PPH5 198 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 DKK1O94907 266 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 CHRNA7P36544 502 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 SULT1A1P50225 295 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 ASCL5Q7RTU5 278 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 MYOZ1Q9NP98 299 aaPredicted RBP13.52□□□□□ -0.24
SYNM-201ENST00000328642 LAMP3Q9UQV4 416 aa13.52□□□□□ -0.24
SYNM-201ENST00000328642 USP9XQ93008 2570 aaPredicted RBP13.52□□□□□ -0.24
SYNM-201ENST00000328642 RBFOX3A6NFN3 312 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 H7BYZ3 331 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 RAMP3O60896 148 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 ACP7Q6ZNF0 438 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 OR5D13Q8NGL4 314 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 HARBI1Q96MB7 349 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 ATP5SQ99766 215 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 SLC35B3Q9H1N7 401 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 UBTD1Q9HAC8 227 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 CALYQ9NYX4 217 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 HSPB1P04792 205 aaKnown RBP13.52□□□□□ -0.25
SYNM-201ENST00000328642 EGR1P18146 543 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 ERHP84090 104 aaKnown RBP13.52□□□□□ -0.25
SYNM-201ENST00000328642 KRTCAP3Q53RY4 240 aa13.52□□□□□ -0.25
SYNM-201ENST00000328642 HSD17B10Q99714 261 aaKnown RBP13.52□□□□□ -0.25
SYNM-201ENST00000328642 MRPL37Q9BZE1 423 aaKnown RBP13.52□□□□□ -0.25
SYNM-201ENST00000328642 CD55P08174 381 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 NQO2P16083 231 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 CD40P25942 277 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 RPEQ96AT9 228 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
SYNM-201ENST00000328642 CABLES2Q9BTV7 478 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 HILPDAQ9Y5L2 63 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
SYNM-201ENST00000328642 H0Y980 276 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 CCL3L1P16619 93 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms