RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SSTR5P35346 364 aa18.68■□□□□ 0.58
PNKP-201ENST00000322344 OR2B11Q5JQS5 317 aa18.68■□□□□ 0.58
PNKP-201ENST00000322344 SLC35E3Q7Z769 313 aa18.68■□□□□ 0.58
PNKP-201ENST00000322344 PPP1R35Q8TAP8 253 aa18.68■□□□□ 0.58
PNKP-201ENST00000322344 EDARADDQ8WWZ3 215 aa18.68■□□□□ 0.58
PNKP-201ENST00000322344 CIB3Q96Q77 187 aaPredicted RBP18.68■□□□□ 0.58
PNKP-201ENST00000322344 GNG13Q9P2W3 67 aa18.68■□□□□ 0.58
PNKP-201ENST00000322344 ZNF98A6NK75 572 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 S100A6P06703 90 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 BCL2P10415 239 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 CFHR2P36980 270 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 CEBPGP53567 150 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 IGFL3Q6UXB1 125 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 SEM1Q6ZVN7 128 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 CENPVQ7Z7K6 275 aaPredicted RBP18.67■□□□□ 0.58
PNKP-201ENST00000322344 OR2Z1Q8NG97 314 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 MRPL37Q9BZE1 423 aaKnown RBP18.67■□□□□ 0.58
PNKP-201ENST00000322344 SRRM5B3KS81 715 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 C15orf65H3BRN8 121 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 TFF1P04155 84 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 TAGLN2P37802 199 aaKnown RBP18.67■□□□□ 0.58
PNKP-201ENST00000322344 BRWD1-AS2P59051 145 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 HOXA4Q00056 320 aaPredicted RBP18.67■□□□□ 0.58
PNKP-201ENST00000322344 H2BFWTQ7Z2G1 175 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 RCC1LQ96I51 464 aaKnown RBP18.67■□□□□ 0.58
PNKP-201ENST00000322344 YPEL4Q96NS1 127 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 VSIRQ9H7M9 311 aa18.67■□□□□ 0.58
PNKP-201ENST00000322344 ZNF737O75373 536 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 GZMHP20718 246 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 NUBP1P53384 320 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 PMS2P11Q13670 270 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 ZNF726P1Q15940 193 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 C3orf36Q3SXR2 165 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 FAM53AQ6NSI3 398 aaPredicted RBP18.66■□□□□ 0.58
PNKP-201ENST00000322344 MUCL1Q96DR8 90 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 P2RX4Q99571 388 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 TMEM147Q9BVK8 224 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 SIRT7Q9NRC8 400 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 CACNA1GO43497 2377 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 UBE2L5PA0A1B0GUS4 154 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 hCG_1809904A0A1W2PP81 198 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 A0A1W2PR64 198 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 A0A1W2PRV1 198 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 IFNA1P01562 189 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 SNRPEP62304 92 aaKnown RBP18.66■□□□□ 0.58
PNKP-201ENST00000322344 TIMM23BQ5SRD1 257 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 OR8G2PQ6IF36 304 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 LCN15Q6UWW0 184 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 BTNL3Q6UXE8 466 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 TPRX1Q8N7U7 411 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 PSG11Q9UQ72 335 aa18.66■□□□□ 0.58
PNKP-201ENST00000322344 C5orf52A6NGY3 159 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 B4DEV8 164 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 FBP1P09467 338 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 DLK1P80370 383 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 Q3ZCU0 254 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 C1QL4Q86Z23 238 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 DTD1Q8TEA8 209 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 SNX22Q96L94 193 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 JPT1Q9UK76 154 aa18.65■□□□□ 0.58
PNKP-201ENST00000322344 IGHV3-43A0A0B4J1X8 118 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 CXorf65A6NEN9 183 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 MGST3O14880 152 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 IGHV3-13P01766 116 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 IGHV3-43DP0DP04 118 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 MRGPRGQ86SM5 289 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 AGMATQ9BSE5 352 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 ZNF665Q9H7R5 613 aa18.64■□□□□ 0.58
PNKP-201ENST00000322344 ST8SIA5O15466 376 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 LY86O95711 162 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 EGR1P18146 543 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 EDDM3AQ14507 147 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 CR1LQ2VPA4 569 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 RFESDQ8TAC1 157 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 CLN8Q9UBY8 286 aa18.64■□□□□ 0.57
PNKP-201ENST00000322344 MAP1LC3B2A6NCE7 125 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 UBE2CO00762 179 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 IFNA17P01571 189 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 ZNF83P51522 516 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 PNRC1Q12796 327 aaPredicted RBP18.63■□□□□ 0.57
PNKP-201ENST00000322344 ADAM5Q6NVV9 412 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 HEPN1Q6WQI6 88 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 OR10P1Q8NGE3 313 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 C12orf57Q99622 126 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 MAP1LC3BQ9GZQ8 125 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 DUSP13Q9UII6 198 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 VAX2Q9UIW0 290 aa18.63■□□□□ 0.57
PNKP-201ENST00000322344 IGKV1D-17A0A075B6S4 117 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 ZFP92A6NM28 416 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 LINC00473A8K010 186 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 PMS2P5A8MQ11 134 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 MBP02144 154 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 GLRXP35754 106 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 FAM90A9PA6NNJ1 464 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 GPR12P47775 334 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 ELLP55199 621 aaPredicted RBP18.62■□□□□ 0.57
PNKP-201ENST00000322344 RAB11AP62491 216 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 FAM90A2PQ658T7 463 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 SSX7Q7RTT5 188 aa18.62■□□□□ 0.57
PNKP-201ENST00000322344 M0R1B8 84 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms