RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ZNF645Q8N7E2 425 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 COQ2Q96H96 371 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 MAP1LC3BQ9GZQ8 125 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 WDR61Q9GZS3 305 aaKnown RBP14.61□□□□□ -0.07
COL9A1-201ENST00000320755 FAM234AQ9H0X4 552 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 SLC39A9Q9NUM3 307 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 PIGBOS1A0A0B4J2F0 54 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 ST8SIA5O15466 376 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 CLN5O75503 358 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 IGHV2-5P01817 119 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 DEFA4P12838 97 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 C9orf106Q8NAJ2 232 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 TAF15Q92804 592 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL9A1-201ENST00000320755 LHX4Q969G2 390 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 PSG11Q9UQ72 335 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 OTOGLQ3ZCN5 2332 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-201ENST00000320755 RNF212BA8MTL3 300 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 S100A8P05109 93 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 COL10A1Q03692 680 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 INO80CQ6PI98 192 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-201ENST00000320755 DPPA3Q6W0C5 159 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 SLC25A22Q9H936 323 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 CLCF1Q9UBD9 225 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 ODAMA1E959 279 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 ZG16O60844 167 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 KIR2DL2P43627 348 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-201ENST00000320755 PDZD11Q5EBL8 140 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 FAM90A2PQ658T7 463 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 OR13A1Q8NGR1 328 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 YPEL4Q96NS1 127 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 DUSP13Q9UII6 198 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 Q3ZCU0 254 aa14.6□□□□□ -0.07
COL9A1-201ENST00000320755 SPAARA0A1B0GVQ0 90 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 IGKV1D-33P01593 117 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 IGKV1-33P01594 117 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 CECR9P0C854 216 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 MDKP21741 143 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-201ENST00000320755 C4orf17Q53FE4 359 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 WDR82Q6UXN9 313 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 ACP7Q6ZNF0 438 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 SSX9Q7RTT3 188 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 RPP25LQ8N5L8 163 aaKnown RBP14.59□□□□□ -0.07
COL9A1-201ENST00000320755 OOEPA6NGQ2 149 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 MSMO1Q15800 293 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 WDR31Q8NA23 367 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 MALSU1Q96EH3 234 aa14.59□□□□□ -0.07
COL9A1-201ENST00000320755 ZNF737O75373 536 aa14.58□□□□□ -0.07
COL9A1-201ENST00000320755 TRGC2P03986 189 aa14.58□□□□□ -0.07
COL9A1-201ENST00000320755 BRWD1-AS2P59051 145 aa14.58□□□□□ -0.07
COL9A1-201ENST00000320755 TMEM41BQ5BJD5 291 aa14.58□□□□□ -0.07
COL9A1-201ENST00000320755 SLC35E3Q7Z769 313 aa14.58□□□□□ -0.07
COL9A1-201ENST00000320755 LOXL4Q96JB6 756 aa14.58□□□□□ -0.07
COL9A1-201ENST00000320755 OPN3Q9H1Y3 402 aaPredicted RBP14.58□□□□□ -0.07
COL9A1-201ENST00000320755 PLCE1Q9P212 2302 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 TRAV1-1A0A0B4J248 108 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 TMEM210A6NLX4 147 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 SMIM6P0DI80 62 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 RD3LP0DJH9 198 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 WT1P19544 449 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-201ENST00000320755 GCH1P30793 250 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 EIF2S3P41091 472 aaKnown RBP14.58□□□□□ -0.08
COL9A1-201ENST00000320755 H2BFWTQ7Z2G1 175 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 SSX3Q99909 188 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 CXXC4Q9H2H0 198 aa14.58□□□□□ -0.08
COL9A1-201ENST00000320755 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-201ENST00000320755 CISD1Q9NZ45 108 aaKnown RBP14.58□□□□□ -0.08
COL9A1-201ENST00000320755 LRRC30A6NM36 301 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 LINC00473A8K010 186 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 SERF2P84101 59 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 CATR1Q13166 79 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 ZNF610Q8N9Z0 462 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 DEFB124Q8NES8 71 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 OR2Z1Q8NG97 314 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 CA5BP1Q8WTZ4 195 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 RPUSD4Q96CM3 377 aaKnown RBP14.57□□□□□ -0.08
COL9A1-201ENST00000320755 PSMG3Q9BT73 122 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-201ENST00000320755 DOK5Q9P104 306 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 LINC00587B1AMM8 73 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 J3QW42 95 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 FABP1P07148 127 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 ACSM6Q6P461 480 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 DTD1Q8TEA8 209 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 GATAD1Q8WUU5 269 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 LRRC29Q8WV35 223 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 FGF7P21781 194 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 BMP5P22003 454 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 MBD3L1Q8WWY6 194 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 HES4Q9HCC6 221 aa14.57□□□□□ -0.08
COL9A1-201ENST00000320755 A0A087WWC5 75 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 TFF3Q07654 80 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 ADIRFQ15847 76 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 CLEC12BQ2HXU8 276 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 SLC35E4Q6ICL7 350 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 TMEM14EPQ6UXP3 125 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 GSN-AS1Q9NRJ2 163 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 HSPB7Q9UBY9 170 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 IGHV3OR15-7A0A075B7D8 119 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 VHLLQ6RSH7 139 aa14.56□□□□□ -0.08
COL9A1-201ENST00000320755 SPNS3Q6ZMD2 512 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms