RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CTSZQ9UBR2 303 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 RCL1Q9Y2P8 373 aaKnown RBP14.71□□□□□ -0.05
RAB39A-201ENST00000320578 MMP24Q9Y5R2 645 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 LINC00862A6NCI5 91 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 DVL1O14640 695 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 GPR137BO60478 399 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 DAOP14920 347 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 KIR2DS2P43631 304 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 CT45A1Q5HYN5 189 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 TMEM200BQ69YZ2 307 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 SPAG16Q8N0X2 631 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 FGFRL1Q8N441 504 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 CT45A3Q8NHU0 189 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 TCTEX1D2Q8WW35 142 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 RAB39BQ96DA2 213 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 ZNF714Q96N38 554 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 C19orf12Q9NSK7 152 aa14.71□□□□□ -0.06
RAB39A-201ENST00000320578 RAI1Q7Z5J4 1906 aaPredicted RBP14.71□□□□□ -0.06
RAB39A-201ENST00000320578 PKDREJQ9NTG1 2253 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 A0A0G2JRQ6 117 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 MEX3AA1L020 520 aaKnown RBP14.7□□□□□ -0.06
RAB39A-201ENST00000320578 FAM90A26D6RGX4 464 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 RAB29O14966 203 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 PROP1O75360 226 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 P0C879 139 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 TPT1P13693 172 aaKnown RBP14.7□□□□□ -0.06
RAB39A-201ENST00000320578 OMGP23515 440 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 BRWD1-AS2P59051 145 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 C8orf31Q8N9H6 132 aa14.7□□□□□ -0.06
RAB39A-201ENST00000320578 DSCAML1Q8TD84 2053 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 KIAA1324LA8MWY0 1029 aaPredicted RBP14.69□□□□□ -0.06
RAB39A-201ENST00000320578 B8ZZF3 427 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 KCNAB3O43448 404 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 SPDEFO95238 335 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 GAPDHP04406 335 aaKnown RBP14.69□□□□□ -0.06
RAB39A-201ENST00000320578 SOD3P08294 240 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 S100A1P23297 94 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 ARHGDIBP52566 201 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 AKR1C2P52895 323 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 ZNF273Q14593 569 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 SLC25A48Q6ZT89 311 aaKnown RBP14.69□□□□□ -0.06
RAB39A-201ENST00000320578 RNASE11Q8TAA1 199 aaKnown RBP14.69□□□□□ -0.06
RAB39A-201ENST00000320578 ADTRPQ96IZ2 230 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 LINC00473A8K010 186 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 C17orf98A8MV24 154 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 TMEM155Q4W5P6 130 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 CXorf66Q5JRM2 361 aaPredicted RBP14.69□□□□□ -0.06
RAB39A-201ENST00000320578 SLC25A32Q9H2D1 315 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 AUP1Q9Y679 476 aa14.69□□□□□ -0.06
RAB39A-201ENST00000320578 BTNL3Q6UXE8 466 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 BAP18Q8IXM2 172 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 ZNF596Q8TC21 504 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 RAB40CQ96S21 281 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 ZC4H2Q9NQZ6 224 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 PRELID3BQ9Y3B1 194 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 NBEAQ8NFP9 2946 aa14.68□□□□□ -0.06
RAB39A-201ENST00000320578 FAM90A9PA6NNJ1 464 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 C19orf84I3L1E1 186 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 SLC31A2O15432 143 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 RAMP3O60896 148 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 HPRT1P00492 218 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 DLX6P56179 175 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 POLR2GP62487 172 aaKnown RBP eCLIP14.67□□□□□ -0.06
RAB39A-201ENST00000320578 ALKAL2Q6UX46 152 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 Q6ZRM9 215 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 OR2C3Q8N628 320 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 RAB1CQ92928 201 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 TIMD4Q96H15 378 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 SLC25A31Q9H0C2 315 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 LYRM2Q9NU23 88 aaPredicted RBP14.67□□□□□ -0.06
RAB39A-201ENST00000320578 CACNG5Q9UF02 275 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 MIOXQ9UGB7 285 aa14.67□□□□□ -0.06
RAB39A-201ENST00000320578 RALYQ9UKM9 306 aaKnown RBP14.67□□□□□ -0.06
RAB39A-201ENST00000320578 A0A087X0M5 115 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 A0A1B0GX30 115 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 A6NNC1 897 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 M0R1X1 148 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 TOR1AO14656 332 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 MMP23AO75900 390 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 JTBO76095 146 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 NFYBP25208 207 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 THBS3P49746 956 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 TMEM33P57088 247 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 PRAMEF5Q5TYX0 476 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 NCR3LG1Q68D85 454 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 ZNF841Q6ZN19 808 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 ODF3L1Q8IXM7 274 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 LINC00311Q8N616 119 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 DDB2Q92466 427 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 ZNF251Q9BRH9 671 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 MED9Q9NWA0 146 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 A0A1W2PPR1 153 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 WRBO00258 174 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 S1PR2O95136 353 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 TAS2R30P59541 319 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 VAMP2P63027 116 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 H1FXQ92522 213 aaKnown RBP14.66□□□□□ -0.06
RAB39A-201ENST00000320578 CHODLQ9H9P2 273 aa14.66□□□□□ -0.06
RAB39A-201ENST00000320578 LYNX1G3V0Z9 82 aa14.65□□□□□ -0.06
RAB39A-201ENST00000320578 LYNX1P0DP58 116 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms