RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PHYHD1Q5SRE7 291 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 MCEMP1Q8IX19 187 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF441Q8N8Z8 693 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 PSMF1Q92530 271 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 APH1AQ96BI3 265 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 OXGR1Q96P68 337 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 FBXL7Q9UJT9 491 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 GVINP1Q7Z2Y8 2422 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 HS3ST1O14792 307 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 SH2D1BO14796 132 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 NXPH2O95156 264 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 SLC38A11Q08AI6 406 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 LHFPL2Q6ZUX7 228 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 SIGLECL1Q8N7X8 197 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF114Q8NC26 417 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 ADPRHL1Q8NDY3 354 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 STARD4Q96DR4 205 aa15.33■□□□□ 0.04
SPSB4-201ENST00000310546 CTXND1A0A1B0GTU2 59 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 NDUFB4O95168 129 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 HIST3H3Q16695 136 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 AKIRIN1Q9H9L7 192 aaPredicted RBP15.32■□□□□ 0.04
SPSB4-201ENST00000310546 FGF21Q9NSA1 209 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 SLC45A2Q9UMX9 530 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 RNF24Q9Y225 148 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 TIAF1O95411 115 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 NAPSAO96009 420 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 FOXL1Q12952 345 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 OR6C1Q96RD1 312 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 UQCR10Q9UDW1 63 aa15.32■□□□□ 0.04
SPSB4-201ENST00000310546 LOC105371242A0A075B767 164 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 IGHEP01854 428 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF16P17020 682 aaPredicted RBP15.31■□□□□ 0.04
SPSB4-201ENST00000310546 PIGCQ92535 297 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF501Q96CX3 271 aaPredicted RBP15.31■□□□□ 0.04
SPSB4-201ENST00000310546 ZFHX4Q86UP3 3567 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 MLNRO43193 412 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 RBFOX2O43251 390 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPSB4-201ENST00000310546 DUX1O43812 170 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 HYPMO75409 117 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 SERPINA7P05543 415 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 GLB1P16278 677 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 LHX2P50458 406 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 OR4C5Q8NGB2 326 aa15.31■□□□□ 0.04
SPSB4-201ENST00000310546 M0QZ24 198 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 OTX1P32242 354 aaPredicted RBP15.3■□□□□ 0.04
SPSB4-201ENST00000310546 CARD18P57730 90 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 RPS16P62249 146 aaKnown RBP15.3■□□□□ 0.04
SPSB4-201ENST00000310546 PLCXD3Q63HM9 321 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 C1orf210Q8IVY1 113 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 SFRP2Q96HF1 295 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 MRPL18Q9H0U6 180 aaKnown RBP15.3■□□□□ 0.04
SPSB4-201ENST00000310546 A0A1W2PQM1 296 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 K7EP13 123 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 CBR3O75828 277 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 KITLGP21583 273 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 S100GP29377 79 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 THBS3P49746 956 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 CCL7P80098 99 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 PLPPR5Q32ZL2 321 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 TRIM61Q5EBN2 209 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 RNF2Q99496 336 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 VPS25Q9BRG1 176 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 IGKV1-6A0A0C4DH72 117 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 ASCL4Q6XD76 172 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 C1orf174Q8IYL3 243 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF611Q8N823 705 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 TMEM105Q8N8V8 129 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF738Q8NE65 137 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF837Q96EG3 531 aaPredicted RBP15.3■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF703Q9H7S9 590 aaPredicted RBP15.3■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF586Q9NXT0 402 aa15.3■□□□□ 0.04
SPSB4-201ENST00000310546 FER1L5A0AVI2 2057 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 IGHV3-15A0A0B4J1V0 119 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 LOC102725191A0A1B0GVB3 256 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 OR6C6A6NF89 314 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 CLDN1O95832 211 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 KRASP01116 189 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 YPEL3P61236 119 aaPredicted RBP15.29■□□□□ 0.04
SPSB4-201ENST00000310546 GNB1P62873 340 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 ZNF90Q03938 601 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 PMS2CLQ68D20 193 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 PLXDC1Q8IUK5 500 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 SGCZQ96LD1 299 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 PARD6GQ9BYG4 376 aaPredicted RBP15.29■□□□□ 0.04
SPSB4-201ENST00000310546 WNT10AQ9GZT5 417 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 MDFIC2A0A1B0GVS7 189 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 IGLC2P0DOY2 106 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 IGLC3P0DOY3 106 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 ATP5G3P48201 142 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 DAZAP2Q15038 168 aaPredicted RBP15.29■□□□□ 0.04
SPSB4-201ENST00000310546 RNPS1Q15287 305 aaKnown RBP15.29■□□□□ 0.04
SPSB4-201ENST00000310546 TMPRSS7Q7RTY8 843 aa15.29■□□□□ 0.04
SPSB4-201ENST00000310546 TRAV39A0A0B4J263 110 aa15.28■□□□□ 0.04
SPSB4-201ENST00000310546 FCN1O00602 326 aa15.28■□□□□ 0.04
SPSB4-201ENST00000310546 SYNGR4O95473 234 aa15.28■□□□□ 0.04
SPSB4-201ENST00000310546 FBLP22087 321 aaKnown RBP15.28■□□□□ 0.04
SPSB4-201ENST00000310546 OR2M3Q8NG83 312 aa15.28■□□□□ 0.04
SPSB4-201ENST00000310546 PILRBQ9UKJ0 227 aa15.28■□□□□ 0.04
SPSB4-201ENST00000310546 TBL2Q9Y4P3 447 aaKnown RBP15.28■□□□□ 0.04
SPSB4-201ENST00000310546 COX11Q9Y6N1 276 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms