RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TMED3Q9Y3Q3 217 aa18.46■□□□□ 0.55
IRF3-201ENST00000309877 AKAP6Q13023 2319 aa18.46■□□□□ 0.55
IRF3-201ENST00000309877 YLPM1P49750 1951 aaKnown RBP18.45■□□□□ 0.54
IRF3-201ENST00000309877 MPTX1A8MV57 137 aa18.45■□□□□ 0.54
IRF3-201ENST00000309877 LMO4P61968 165 aa18.45■□□□□ 0.54
IRF3-201ENST00000309877 ABHD12Q8N2K0 398 aa18.45■□□□□ 0.54
IRF3-201ENST00000309877 NMES1Q9C002 83 aa18.45■□□□□ 0.54
IRF3-201ENST00000309877 A0A087X0M5 115 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 SAA2-SAA4A0A096LPE2 208 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 A0A1B0GX30 115 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 DUXBA0A1W2PPF3 345 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 SAA2P0DJI9 122 aaPredicted RBP18.44■□□□□ 0.54
IRF3-201ENST00000309877 DUTP33316 252 aaKnown RBP18.44■□□□□ 0.54
IRF3-201ENST00000309877 DSCR9P59020 149 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 FGL1Q08830 312 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 IAH1Q2TAA2 248 aaPredicted RBP18.44■□□□□ 0.54
IRF3-201ENST00000309877 TCTEX1D1Q8N7M0 179 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 C8orf31Q8N9H6 132 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 S1PR3Q99500 378 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 GSKIPQ9P0R6 139 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 MALRD1Q5VYJ5 2156 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 J3QR06 171 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 PROP1O75360 226 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 KRTAP10-9P60411 292 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 OR2B11Q5JQS5 317 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 ODF3L1Q8IXM7 274 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 SPAG16Q8N0X2 631 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 OR10X1Q8NGY0 326 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 OR9G1Q8NH87 305 aa18.44■□□□□ 0.54
IRF3-201ENST00000309877 LINC00473A8K010 186 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 KIAA1324LA8MWY0 1029 aaPredicted RBP18.43■□□□□ 0.54
IRF3-201ENST00000309877 G3V3Q6 166 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 TOR1AO14656 332 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 ZFP36P26651 326 aaKnown RBP18.43■□□□□ 0.54
IRF3-201ENST00000309877 ARF6P62330 175 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 LRRC37A5PQ49AS3 106 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 ZNF585BQ52M93 769 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 LINC00311Q8N616 119 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 DRAXINQ8NBI3 349 aaPredicted RBP18.43■□□□□ 0.54
IRF3-201ENST00000309877 PPP1R1CQ8WVI7 109 aa18.43■□□□□ 0.54
IRF3-201ENST00000309877 VWC2LB2RUY7 222 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 ENSAO43768 121 aaKnown RBP18.42■□□□□ 0.54
IRF3-201ENST00000309877 RPA2P15927 270 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 LPAR6P43657 344 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 LINC00205P59089 165 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 LCN2P80188 198 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 OR11H4Q8NGC9 324 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 ZNRD1Q9P1U0 126 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 PRELID3BQ9Y3B1 194 aa18.42■□□□□ 0.54
IRF3-201ENST00000309877 M0R1W7 72 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 VDAC1P21796 283 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 ZNF816Q0VGE8 651 aaPredicted RBP18.41■□□□□ 0.54
IRF3-201ENST00000309877 NCR3LG1Q68D85 454 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 C1orf229Q6ZS94 237 aaPredicted RBP18.41■□□□□ 0.54
IRF3-201ENST00000309877 RNASE11Q8TAA1 199 aaKnown RBP18.41■□□□□ 0.54
IRF3-201ENST00000309877 ZNF596Q8TC21 504 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 CD300LFQ8TDQ1 290 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 ZNF251Q9BRH9 671 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 FAM212BQ9NTI7 297 aaPredicted RBP18.41■□□□□ 0.54
IRF3-201ENST00000309877 A8MXK9 166 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 RAMP3O60896 148 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 THBS3P49746 956 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 PRRX1P54821 245 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 ZBTB8BQ8NAP8 495 aaPredicted RBP18.41■□□□□ 0.54
IRF3-201ENST00000309877 ADTRPQ96IZ2 230 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 SPIN2AQ99865 258 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 SPIN2BQ9BPZ2 258 aa18.41■□□□□ 0.54
IRF3-201ENST00000309877 DOCK11Q5JSL3 2073 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 IGHV4-30-2A0A087WSY4 118 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 IGHV2-26A0A0B4J1V2 119 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 FOXH1O75593 365 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 PSMB6P28072 239 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 Q8N7P7 452 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 TNFRSF14Q92956 283 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 CLEC7AQ9BXN2 247 aa18.4■□□□□ 0.54
IRF3-201ENST00000309877 USP9YO00507 2555 aaPredicted RBP18.4■□□□□ 0.54
IRF3-201ENST00000309877 IGHV4-61A0A0C4DH41 118 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 FCGR3BO75015 233 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 IGKV1-39P01597 117 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 IGKV1D-39P04432 117 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 KIR2DS2P43631 304 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 AKR1C2P52895 323 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 THOC7Q6I9Y2 204 aaKnown RBP18.39■□□□□ 0.53
IRF3-201ENST00000309877 KIR3DL3Q8N743 410 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 GRPEL2Q8TAA5 225 aa18.39■□□□□ 0.53
IRF3-201ENST00000309877 RRNAD1Q96FB5 475 aaKnown RBP18.39■□□□□ 0.53
IRF3-201ENST00000309877 BEX4Q9NWD9 120 aaPredicted RBP18.39■□□□□ 0.53
IRF3-201ENST00000309877 FXYD6-FXYD2A0A087WZ82 144 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 TRAV14DV4A0A0A6YYC5 116 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 ATG12O94817 140 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 COX7A1P24310 79 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 IL3RAP26951 378 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 DLX1P56177 255 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 BRWD1-AS2P59051 145 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 CLEC12BQ2HXU8 276 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 HIST2H2BCQ6DN03 193 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 ZNF833PQ6ZTB9 187 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 OR13D1Q8NGV5 346 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 THAP6Q8TBB0 222 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 TMEM186Q96B77 213 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms