RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TRAV40A0A0B4J280 105 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 KBTBD11-OT1A0A1B0GTJ5 212 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 TRAPPC2P0DI81 140 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 TRAPPC2BP0DI82 140 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 PPOXP50336 477 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF260Q3ZCT1 412 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 TCTEX1D1Q8N7M0 179 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 OR10S1Q8NGN2 331 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 TMEM14DPA8MWL7 114 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 RNF223E7ERA6 249 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 H2AFB1P0C5Y9 115 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 HTD2P86397 168 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 LAMTOR1Q6IAA8 161 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF529Q6P280 563 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 C1QL2Q7Z5L3 287 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF525Q8N782 197 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 TPPP3Q9BW30 176 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 SLC25A22Q9H936 323 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 RNF114Q9Y508 228 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 APOC3P02656 99 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 METTL15P1P0C7V9 234 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 MGST1P10620 155 aaKnown RBP7.8□□□□□ -1.16
PTPRE-202ENST00000306042 ORM2P19652 201 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 CD200R1LQ6Q8B3 271 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 CLEC18BQ6UXF7 455 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 F8W036 122 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 LY6HO94772 140 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
PTPRE-202ENST00000306042 CCL3L1P16619 93 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 CLEC9AQ6UXN8 241 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 ATP5SQ99766 215 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 CADP27708 2225 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 E9PQ18 207 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 FOXB2Q5VYV0 432 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF485Q8NCK3 441 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 ASB13Q8WXK3 278 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 C12orf77C9JDV5 145 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 TMEM178BH3BS89 294 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 KCNAB3O43448 404 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 ALX3O95076 343 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 PTBP3O95758 552 aaKnown RBP7.8□□□□□ -1.16
PTPRE-202ENST00000306042 RHOBP62745 196 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 OR13A1Q8NGR1 328 aa7.8□□□□□ -1.16
PTPRE-202ENST00000306042 C1QL1O75973 258 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 NPY1RP25929 384 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 LYZL4Q96KX0 146 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 Q96MF0 132 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 PARP12Q9H0J9 701 aaKnown RBP7.79□□□□□ -1.16
PTPRE-202ENST00000306042 MIXL1Q9H2W2 232 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 TIMM23O14925 209 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 POLR2GP62487 172 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPRE-202ENST00000306042 WDR89Q96FK6 387 aaPredicted RBP7.79□□□□□ -1.16
PTPRE-202ENST00000306042 DOK5Q9P104 306 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 SCN8AQ9UQD0 1980 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 IGHV3-21A0A0B4J1V1 117 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 SIGLEC5O15389 551 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 ACAA1P09110 424 aaPredicted RBP7.79□□□□□ -1.16
PTPRE-202ENST00000306042 COL8A1P27658 744 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 DVL1P1P54792 670 aaPredicted RBP7.79□□□□□ -1.16
PTPRE-202ENST00000306042 HIST3H3Q16695 136 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 VAX1Q5SQQ9 334 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 TMUB2Q71RG4 321 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 SH3BGRL3Q9H299 93 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF319Q9P2F9 582 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 A0A0G2JK05 382 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 POM121CA8CG34 1229 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 SRRM5B3KS81 715 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 ADAP1O75689 374 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 OR8I2Q8N0Y5 310 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 LINC01356Q8N9X3 169 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 OR1L4Q8NGR5 311 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 TMEM158Q8WZ71 300 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 MS4A10Q96PG2 267 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 PRELID1Q9Y255 219 aa7.79□□□□□ -1.16
PTPRE-202ENST00000306042 A0A1B0GU03 582 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 IGKV1D-33P01593 117 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 IGKV1-33P01594 117 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF250P15622 560 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 CCL1P22362 96 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 FLI1Q01543 452 aaPredicted RBP7.78□□□□□ -1.16
PTPRE-202ENST00000306042 GUCA2BQ16661 112 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 TIGITQ495A1 244 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 ASPHD2Q6ICH7 369 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 SLC35E3Q7Z769 313 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 OR2C3Q8N628 320 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 ST8SIA2Q92186 375 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 RGP1Q92546 391 aaPredicted RBP7.78□□□□□ -1.16
PTPRE-202ENST00000306042 SLA2Q9H6Q3 261 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 OR2A4O95047 310 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 RAG2P55895 527 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 HGFACQ04756 655 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 RAB32Q13637 225 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 FXYD3Q14802 87 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 WDR25Q64LD2 544 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms