RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 LYRM2Q9NU23 88 aaPredicted RBP9.46□□□□□ -0.9
SCG2-201ENST00000305409 ZNRD1Q9P1U0 126 aa9.46□□□□□ -0.9
SCG2-201ENST00000305409 IL19Q9UHD0 177 aa9.46□□□□□ -0.9
SCG2-201ENST00000305409 CLEC18AA5D8T8 446 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 CLDN1O95832 211 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 GAPDHP04406 335 aaKnown RBP9.45□□□□□ -0.9
SCG2-201ENST00000305409 CFHR2P36980 270 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
SCG2-201ENST00000305409 SSX9Q7RTT3 188 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 CLEC18CQ8NCF0 446 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 ZFP57Q9NU63 452 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 AKAP6Q13023 2319 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 TMPRSS2O15393 492 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 MMP23AO75900 390 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 CLDN14O95500 239 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 PRH1P02810 166 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 METTL15P1P0C7V9 234 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 SULT1A2P50226 295 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 EIF5AP63241 154 aaKnown RBP9.45□□□□□ -0.9
SCG2-201ENST00000305409 TAGLNQ01995 201 aaKnown RBP9.45□□□□□ -0.9
SCG2-201ENST00000305409 TLE1Q04724 770 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 LY6DQ14210 128 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 NCR3LG1Q68D85 454 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 VKORC1L1Q8N0U8 176 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 NUP37Q8NFH4 326 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 KCNJ16Q9NPI9 418 aa9.45□□□□□ -0.9
SCG2-201ENST00000305409 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 A0A1B0GU03 582 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 DUXBA0A1W2PPF3 345 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 KRBOX1C9JBD0 128 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 CCL21O00585 134 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 TNFSF4P23510 183 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 MORN2Q502X0 79 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 EIF4E3Q8N5X7 224 aaKnown RBP9.44□□□□□ -0.9
SCG2-201ENST00000305409 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 SVEP1Q4LDE5 3571 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
SCG2-201ENST00000305409 C17orf100A8MU93 164 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 E7EQL1 145 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 RBMXL2O75526 392 aaKnown RBP9.44□□□□□ -0.9
SCG2-201ENST00000305409 NDUFB7P17568 137 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 ADCYAP1P18509 176 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 GATA4P43694 442 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 GPR12P47775 334 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 GNG10P50151 68 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 ARL16Q0P5N6 197 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 SWI5Q1ZZU3 235 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 SPANXN5Q5MJ07 72 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 SMIM8Q96KF7 97 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 VKORC1Q9BQB6 163 aa9.44□□□□□ -0.9
SCG2-201ENST00000305409 SHISA9B4DS77 424 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 M0R1X1 148 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 SYNGR2O43760 224 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 FCGR3BO75015 233 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 IRF2P14316 349 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
SCG2-201ENST00000305409 GZMHP20718 246 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 ATP6V0CP27449 155 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 LOXL3P58215 753 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
SCG2-201ENST00000305409 C17orf58Q2M2W7 97 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 STUMQ69YW2 141 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
SCG2-201ENST00000305409 PPP1R35Q8TAP8 253 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 C9JQL5 133 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCG2-201ENST00000305409 SPP1P10451 314 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 MIDNQ504T8 468 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 TCF23Q7RTU1 214 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
SCG2-201ENST00000305409 OR2G3Q8NGZ4 309 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 LRRC46Q96FV0 321 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 SLC25A31Q9H0C2 315 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 SAP30LQ9HAJ7 183 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 CLN8Q9UBY8 286 aa9.43□□□□□ -0.9
SCG2-201ENST00000305409 ARFGEF3Q5TH69 2177 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.42□□□□□ -0.9
SCG2-201ENST00000305409 LYNX1G3V0Z9 82 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 S100A6P06703 90 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 LYNX1P0DP58 116 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 CAMLGP49069 296 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 PJVKQ0ZLH3 352 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 GUCA2BQ16661 112 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 FAM213BQ8TBF2 198 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 LSM10Q969L4 123 aaKnown RBP9.42□□□□□ -0.9
SCG2-201ENST00000305409 C14orf79Q96F83 325 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 ARV1Q9H2C2 271 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 MMP26Q9NRE1 261 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 FAM212BQ9NTI7 297 aaPredicted RBP9.42□□□□□ -0.9
SCG2-201ENST00000305409 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
SCG2-201ENST00000305409 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
SCG2-201ENST00000305409 RNF212BA8MTL3 300 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms