RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 Q6ZS49 121 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 GDPD1Q8N9F7 314 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 TMEM229BQ8NBD8 167 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 DRAXINQ8NBI3 349 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 OR5AP2Q8NGF4 316 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 OR51S1Q8NGJ8 323 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 OR13C8Q8NGS7 320 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 ZFAND2BQ8WV99 257 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 GALMQ96C23 342 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 BEX2Q9BXY8 128 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 NCOR1P1Q9H4R4 102 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 LINC00574Q9H8X3 128 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 BEX1Q9HBH7 125 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 NECAP2Q9NVZ3 263 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 RABL2AQ9UBK7 228 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 RABL2BQ9UNT1 228 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 FLVCR2Q9UPI3 526 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 VSIG4Q9Y279 399 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 FLNAP21333 2647 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 DOCK11Q5JSL3 2073 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 A0A1W2PPH5 198 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 A0A1W2PPI3 338 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 H3BUI4 141 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 J3QLI3 93 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 TOR1AO14656 332 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 YPEL1O60688 119 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 PROP1O75360 226 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 IGLV1-47P01700 117 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 CSF1P09603 554 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 AKAIN1P0CW23 69 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 CD34P28906 385 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 GPR12P47775 334 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 INPP1P49441 399 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 RAB13P51153 203 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 RPL30P62888 115 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 MRPS10P82664 201 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 DCTN2Q13561 401 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 DYRK1AQ13627 763 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 SSX2Q16385 188 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 LY6EQ16553 131 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 VAX1Q5SQQ9 334 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 TPTE2P1Q5T6R2 138 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 GPR157Q5UAW9 335 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 AADACL3Q5VUY0 350 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 NCR3LG1Q68D85 454 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF818PQ6ZRF7 136 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 SLC25A48Q6ZT89 311 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 OVCH2Q7RTZ1 564 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 TOMM5Q8N4H5 51 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 DRAM1Q8N682 238 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 SIGLECL1Q8N7X8 197 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF565Q8N9K5 539 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 ADAD2Q8NCV1 583 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 OR2AK2Q8NG84 335 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 OR13D1Q8NGV5 346 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 OR10X1Q8NGY0 326 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 OR9G1Q8NH87 305 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 OR10J5Q8NHC4 309 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 MARCH1Q8TCQ1 289 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 MOB3AQ96BX8 217 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 YPEL2Q96QA6 119 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF251Q9BRH9 671 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 SLC5A7Q9GZV3 580 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 MMP28Q9H239 520 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 SDHAF2Q9NX18 166 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 TAS2R8Q9NYW2 309 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 RBM7Q9Y580 266 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 TACC2O95359 2948 aa5.23□□□□□ -1.57
DEPDC4-201ENST00000299185 NBEAL1Q6ZS30 2694 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 FN1P02751 2386 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 A0A087X0M5 115 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 A0A1B0GX30 115 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 LY6LH3BQJ8 138 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 TIMM23O14925 209 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 ARPC1BO15143 372 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 LYRM1O43325 122 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 PEX14O75381 377 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 IGLV2-14P01704 120 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 IGHV4-59P01825 116 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 RBP4P02753 201 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 RLN1P04808 185 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 RPA2P15927 270 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 GZMHP20718 246 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 ZBTB25P24278 435 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 CNTFRP26992 372 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 LUMP51884 338 aaPredicted RBP5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 UBE2E1P51965 193 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 RAB25P57735 213 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 TSPAN5P62079 268 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 HTD2P86397 168 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 ACTBL2Q562R1 376 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 IDO2Q6ZQW0 420 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 LHFPL1Q86WI0 220 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 TMEM219Q86XT9 240 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF383Q8NA42 475 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 OR11H6Q8NGC7 330 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 OR52M1Q8NGK5 317 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 OR51H1Q8NH63 302 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 C15orf40Q8WUR7 153 aa5.22□□□□□ -1.57
DEPDC4-201ENST00000299185 BORCS5Q969J3 196 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms