RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CD300CQ08708 224 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 LYPD2Q6UXB3 125 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 TMEM86BQ8N661 226 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 TPRX1Q8N7U7 411 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 CAPSLQ8WWF8 208 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 EDARADDQ8WWZ3 215 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 DMRTB1Q96MA1 342 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 RTBDNQ9BSG5 229 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-201ENST00000298966 CHIAQ9BZP6 476 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 CALYQ9NYX4 217 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 CTSZQ9UBR2 303 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 CLN8Q9UBY8 286 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 RNF114Q9Y508 228 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 A0A1B0GW55 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 BOLA2-SMG1P6H3BVE0 249 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 SLC22A5O76082 557 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L2P0CJ85 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L3P0CJ86 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L4P0CJ87 422 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L5P0CJ88 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L6P0CJ89 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L7P0CJ90 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 NFYAP23511 347 aaPredicted RBP17.12■□□□□ 0.33
SMCO4-201ENST00000298966 LUMP51884 338 aaPredicted RBP17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DHRS2Q13268 280 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 Q3ZCU0 254 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 ABCA11PQ4W5N1 156 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4L9Q6RFH8 374 aaPredicted RBP17.12■□□□□ 0.33
SMCO4-201ENST00000298966 Q6YL49 198 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 PRR18Q8N4B5 295 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 ADAD2Q8NCV1 583 aaKnown RBP17.12■□□□□ 0.33
SMCO4-201ENST00000298966 OR11H7Q8NGC8 314 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 OR52B4Q8NGK2 314 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 AKR1E2Q96JD6 320 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 RSRP1Q9BUV0 290 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 DUX4Q9UBX2 424 aa17.12■□□□□ 0.33
SMCO4-201ENST00000298966 TRAV39A0A0B4J263 110 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 C9orf170A2RU37 121 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 YPEL1O60688 119 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 HLA-AP01891 365 aaKnown RBP17.11■□□□□ 0.33
SMCO4-201ENST00000298966 SSTR5P35346 364 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 CEACAM6P40199 344 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 FXYD4P59646 89 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 BPIFB3P59826 476 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 KRTAP10-3P60369 221 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 RND3P61587 244 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 PPP1R1AQ13522 171 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 GPR157Q5UAW9 335 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 ZBTB34Q8NCN2 500 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 OR10V1Q8NGI7 309 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 OR1L1Q8NH94 360 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 TMEM230Q96A57 120 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 YPEL2Q96QA6 119 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 OR2S2Q9NQN1 319 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 RDH8Q9NYR8 311 aa17.11■□□□□ 0.33
SMCO4-201ENST00000298966 PIGBOS1A0A0B4J2F0 54 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 B3GALNT1O75752 331 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 DUS4LO95620 317 aaKnown RBP17.1■□□□□ 0.33
SMCO4-201ENST00000298966 TSPAN15O95858 294 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 AKR1C4P17516 323 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 RPL15P61313 204 aaKnown RBP17.1■□□□□ 0.33
SMCO4-201ENST00000298966 CD83Q01151 205 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 SGPP2Q8IWX5 399 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 CMTM1Q8IZ96 169 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 C12orf45Q8N5I9 185 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-201ENST00000298966 OR2AK2Q8NG84 335 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 C8orf46Q8TAG6 207 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 MITD1Q8WV92 249 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 TOMM40LQ969M1 308 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 ZNF714Q96N38 554 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 DCTN5Q9BTE1 182 aa17.1■□□□□ 0.33
SMCO4-201ENST00000298966 RANGRFQ9HD47 186 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-201ENST00000298966 A0A0B4J2A0 478 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 GPR31O00270 319 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 RBP4P02753 201 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 ANXA3P12429 323 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 C17orf58Q2M2W7 97 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 ZNF841Q6ZN19 808 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 FAM110DQ8TAY7 271 aaPredicted RBP17.09■□□□□ 0.33
SMCO4-201ENST00000298966 H1FXQ92522 213 aaKnown RBP17.09■□□□□ 0.33
SMCO4-201ENST00000298966 SLC5A7Q9GZV3 580 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 IDI2-AS1Q9NZ38 188 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 OR1A1Q9P1Q5 309 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 MGAT4CQ9UBM8 478 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 SHPKQ9UHJ6 478 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 KCNIP3Q9Y2W7 256 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 POMT1Q9Y6A1 747 aa17.09■□□□□ 0.33
SMCO4-201ENST00000298966 SFT2D2O95562 160 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 CXCL3P19876 107 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 WDR25Q64LD2 544 aaPredicted RBP17.08■□□□□ 0.32
SMCO4-201ENST00000298966 HEPN1Q6WQI6 88 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 KCTD9Q7L273 389 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 TCF23Q7RTU1 214 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 ASB13Q8WXK3 278 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 SLC2A9Q9NRM0 540 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 GNG12Q9UBI6 72 aa17.08■□□□□ 0.32
SMCO4-201ENST00000298966 RBM7Q9Y580 266 aaKnown RBP17.08■□□□□ 0.32
SMCO4-201ENST00000298966 CRYM-AS1A6NIL9 109 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 VAMP1P23763 118 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms