RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZNF658BQ4V348 819 aaPredicted RBP11.56□□□□□ -0.56
HPS3-201ENST00000296051 TP53RKQ96S44 253 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 MESP1Q9BRJ9 268 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 PLCE1Q9P212 2302 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 THBS3P49746 956 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 CRIPAKQ8N1N5 446 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 DNPH1O43598 174 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 CSN1S1P47710 185 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 SGMS2Q8NHU3 365 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
HPS3-201ENST00000296051 OR6C3Q9NZP0 311 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 C20orf202A1L168 122 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 HLA-GP17693 338 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 G6PCP35575 357 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 NPBWR2P48146 333 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 CAMPP49913 170 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 IGHV3OR15-7A0A075B7D8 119 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 SCN8AQ9UQD0 1980 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 B4DEV8 164 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 CCL20P78556 96 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 KCNIP2Q9NS61 270 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 RPRMQ9NS64 109 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 VWA8A3KMH1 1905 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 DOCK11Q5JSL3 2073 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 K7EQM0 130 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 FGF16O43320 207 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 Q56UQ5 140 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 OIT3Q8WWZ8 545 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 TSC2P49815 1807 aa11.55□□□□□ -0.56
HPS3-201ENST00000296051 TRAF3IP2O43734 574 aaPredicted RBP11.54□□□□□ -0.56
HPS3-201ENST00000296051 ZNF253O75346 499 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 RBP4P02753 201 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 MRPL54Q6P161 138 aaKnown RBP11.54□□□□□ -0.56
HPS3-201ENST00000296051 Q6ZN92 141 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 Q8WTZ3 238 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 TMEM222Q9H0R3 208 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 PLXND1Q9Y4D7 1925 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 IGKV3-7A0A075B6H7 116 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 IGKV1D-8A0A087WSZ0 117 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 IGSF23A1L1A6 192 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 CYB5R3P00387 301 aaPredicted RBP11.54□□□□□ -0.56
HPS3-201ENST00000296051 IER3P46695 156 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 UBE2G1P62253 170 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 TMEM183BQ1AE95 376 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 SIGLEC12Q96PQ1 595 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 PPIAL4EA0A075B759 164 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 PPIAL4DF5H284 164 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 PITX3O75364 302 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 PPIAL4FP0DN26 164 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 SPACA3Q8IXA5 215 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 OR2T6Q8NHC8 308 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 POM121L2Q96KW2 1035 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 ZNF319Q9P2F9 582 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 PPIAL4AQ9Y536 164 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 ZNF729A6NN14 1252 aaPredicted RBP11.54□□□□□ -0.56
HPS3-201ENST00000296051 TCF21O43680 179 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 HRASP01112 189 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 TMEM187Q14656 261 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 SLC35E3Q7Z769 313 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 COA4Q9NYJ1 87 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 RNF115Q9Y4L5 304 aa11.54□□□□□ -0.56
HPS3-201ENST00000296051 MELTFP08582 738 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 RBM11P57052 281 aaKnown RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 RBKSQ9H477 322 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 BARX1Q9HBU1 254 aaPredicted RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 H1FOOQ8IZA3 346 aaPredicted RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 OR4C12Q96R67 309 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 AUP1Q9Y679 476 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 GRIFINA4D1Z8 144 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 IGLV3-19P01714 112 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 CD59P13987 128 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 IGFBP3P17936 291 aaPredicted RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 NUBP1P53384 320 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 RPL31P62899 125 aaKnown RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 MRPS11P82912 194 aaKnown RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 MEF2BQ02080 365 aaPredicted RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 PAX5Q02548 391 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 ZP4Q12836 540 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 SCARF2Q96GP6 870 aaPredicted RBP11.53□□□□□ -0.56
HPS3-201ENST00000296051 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 NDUFB4O95168 129 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 MISP3Q96FF7 219 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 TMEM147Q9BVK8 224 aa11.53□□□□□ -0.56
HPS3-201ENST00000296051 PSG4Q00888 419 aa11.52□□□□□ -0.56
HPS3-201ENST00000296051 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.56
HPS3-201ENST00000296051 TUBD1Q9UJT1 453 aa11.52□□□□□ -0.56
HPS3-201ENST00000296051 INSIG2Q9Y5U4 225 aa11.52□□□□□ -0.56
HPS3-201ENST00000296051 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms