RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ZNF343Q6P1L6 599 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 SMIM8Q96KF7 97 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 MRPS18CQ9Y3D5 142 aaKnown RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 CHCHD2Q9Y6H1 151 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 SLC25A53Q5H9E4 307 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 CDCP2Q5VXM1 449 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 PQLC2Q6ZP29 291 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 GBGT1Q8N5D6 347 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 RGP1Q92546 391 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 MS4A7Q9GZW8 240 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 TRAV20A0A0B4J274 112 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF729A6NN14 1252 aaPredicted RBP10.98□□□□□ -0.65
PTCD1-201ENST00000292478 SNURFLB1AK76 121 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 CD8AP01732 235 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 TMEM187Q14656 261 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 LDLRAD3Q86YD5 345 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 OR5P3Q8WZ94 311 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 STARD4Q96DR4 205 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 TMEM208Q9BTX3 173 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 C19orf24Q9BVV8 132 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 TM2D1Q9BX74 207 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 A0A1W2PPE3 182 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 CFDP00746 253 aaPredicted RBP10.98□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF880Q6PDB4 577 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 ELOVL5Q9NYP7 299 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 RECKO95980 971 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 HSPE1P61604 102 aaKnown RBP10.98□□□□□ -0.65
PTCD1-201ENST00000292478 PAFAH1B2P68402 229 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 CYB561D1Q8N8Q1 229 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 LRRC75AQ8NAA5 344 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 FAM222BQ8WU58 562 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 RHOVQ96L33 236 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 CLEC5AQ9NY25 188 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 PSME4Q14997 1843 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 PRSS1P07477 247 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 HERVK_113P61574 105 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 RUNX1Q01196 453 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
PTCD1-201ENST00000292478 SLC35E4Q6ICL7 350 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 CDC42EP3Q9UKI2 254 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 MELTFP08582 738 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 FAM106CPP0CH98 169 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 CRYBA2P53672 197 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 MRPL54Q6P161 138 aaKnown RBP10.98□□□□□ -0.65
PTCD1-201ENST00000292478 TPRX1Q8N7U7 411 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 TMEM74BQ9NUR3 256 aa10.98□□□□□ -0.65
PTCD1-201ENST00000292478 IER3P46695 156 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 POC1AQ8NBT0 407 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 CISD1Q9NZ45 108 aaKnown RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 PATJQ8NI35 1801 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 SCGB1C2P0DMR2 95 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 CXorf66Q5JRM2 361 aaPredicted RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 NSUN5P2Q63ZY6 315 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 RBPMS2Q6ZRY4 209 aaKnown RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 TEX29Q8N6K0 151 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 SPAG17Q6Q759 2223 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 TPRP12270 2363 aaKnown RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 A8MWL6 223 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 REG1BP48304 166 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 Q6ZT83 130 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF735P0CB33 412 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 SUCLG1P53597 346 aaKnown RBP10.97□□□□□ -0.65
PTCD1-201ENST00000292478 H2BFSP57053 126 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 LRRC75BQ2VPJ9 315 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF826PQ6ZT77 177 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 FADS6Q8N9I5 356 aa10.97□□□□□ -0.65
PTCD1-201ENST00000292478 TRAV30A0A087WSZ9 112 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 CXorf65A6NEN9 183 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 TIAF1O95411 115 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 TMEM186Q96B77 213 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 WNT5AP41221 380 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 MIOXQ9UGB7 285 aa10.96□□□□□ -0.65
PTCD1-201ENST00000292478 NHLRC3Q5JS37 347 aa10.96□□□□□ -0.66
PTCD1-201ENST00000292478 ASPHD2Q6ICH7 369 aa10.96□□□□□ -0.66
PTCD1-201ENST00000292478 TIMP4Q99727 224 aa10.96□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF703Q9H7S9 590 aaPredicted RBP10.96□□□□□ -0.66
PTCD1-201ENST00000292478 TMEM140Q9NV12 185 aa10.96□□□□□ -0.66
PTCD1-201ENST00000292478 APC2O95996 2303 aa10.96□□□□□ -0.66
PTCD1-201ENST00000292478 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.66
PTCD1-201ENST00000292478 AICDAQ9GZX7 198 aa10.96□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF552Q9H707 407 aaPredicted RBP10.96□□□□□ -0.66
PTCD1-201ENST00000292478 Q6ZN92 141 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 WDR31Q8NA23 367 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 SGMS2Q8NHU3 365 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 SLC25A33Q9BSK2 321 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 METTL1Q9UBP6 276 aaKnown RBP10.95□□□□□ -0.66
PTCD1-201ENST00000292478 DANCRP0C864 163 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 ECSCRQ19T08 205 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms