RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TRAV34A0A0B4J273 112 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 CD1AP06126 327 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 ZNF708P17019 499 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGFBP3P17936 291 aaPredicted RBP4.08□□□□□ -1.76
UBR1-201ENST00000290650 BTNL8Q6UX41 500 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SSX7Q7RTT5 188 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 FADS6Q8N9I5 356 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IL22RA2Q969J5 263 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 BORCS7Q96B45 105 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 RAB40CQ96S21 281 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 RBKSQ9H477 322 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SLC2A8Q9NY64 477 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGKV1-27A0A075B6S5 117 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGKV1D-13A0A0B4J2D9 117 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGHV3-35A0A0C4DH35 117 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 CD55P08174 381 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGKV1-13P0DP09 117 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 LYZP61626 148 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 FOXF2Q12947 444 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 PMS2P11Q13670 270 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 ABHD12Q8N2K0 398 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 GINS3Q9BRX5 216 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IER2Q9BTL4 223 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 MRPL13Q9BYD1 178 aaKnown RBP4.08□□□□□ -1.76
UBR1-201ENST00000290650 ZDHHC11Q9H8X9 412 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 CLDN16Q9Y5I7 305 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TRAPPC1Q9Y5R8 145 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 C11orf94C9JXX5 98 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 NPIPB7O75200 414 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 PTGDSP41222 190 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 PSG5Q15238 335 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 LY6G6FQ5SQ64 297 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 UQCC3Q6UW78 93 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TMEM252Q8N6L7 170 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 OR5B3Q8NH48 314 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SLC35D1Q9NTN3 355 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SPRR3Q9UBC9 169 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SPG11Q96JI7 2443 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGHV3OR16-10A0A075B7F0 116 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 XKRY2A2RUG3 117 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SLC31A2O15432 143 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 PRF1P14222 555 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 ACSF3Q4G176 576 aaPredicted RBP4.08□□□□□ -1.76
UBR1-201ENST00000290650 FGFRL1Q8N441 504 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 ZNF561Q8N587 486 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 BMPERQ8N8U9 685 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 OR10A7Q8NGE5 316 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 FAM122AQ96E09 287 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 HES4Q9HCC6 221 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 WIPI2Q9Y4P8 454 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 LTBP2Q14767 1821 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 OR4A8P0C604 315 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 F2RP25116 425 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 ZNF441Q8N8Z8 693 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 LINC01560Q8TB33 94 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TMEM230Q96A57 120 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 RPEQ96AT9 228 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 FLYWCH2Q96CP2 140 aaKnown RBP4.08□□□□□ -1.76
UBR1-201ENST00000290650 PHYHIPLQ96FC7 376 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 CTDSP1Q9GZU7 261 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 Q9N2K0 584 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TGIF2-C20orf24A0A0A6YYL0 155 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 CCL21O00585 134 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IGHV1-2P23083 117 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 IL3RAP26951 378 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TMEM187Q14656 261 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TMEM241Q24JQ0 296 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 LILRB1Q8NHL6 650 aaPredicted RBP4.08□□□□□ -1.76
UBR1-201ENST00000290650 FAM210BQ96KR6 192 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 HARBI1Q96MB7 349 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 ZNF251Q9BRH9 671 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TMEM222Q9H0R3 208 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 SELENOKQ9Y6D0 94 aa4.08□□□□□ -1.76
UBR1-201ENST00000290650 TECTAO75443 2155 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 IGKV1-12A0A0C4DH73 117 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 RNF222A6NCQ9 220 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 RAMP3O60896 148 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 IGKV1D-12P01611 117 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CT45A6P0DMU7 189 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CT45A5P0DMU8 189 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CT45A7P0DMV0 189 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 LHX2P50458 406 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 FAM3BP58499 235 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 RPL31P62899 125 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 CT45A1Q5HYN5 189 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 FDX2Q6P4F2 183 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 OR4A4PQ8NGN8 299 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CT45A3Q8NHU0 189 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 GTF3AQ92664 365 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 TIMD4Q96H15 378 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CIB3Q96Q77 187 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 NRIP2Q9BQI9 281 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ALX4Q9H161 411 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 BARX1Q9HBU1 254 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 FUT9Q9Y231 359 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 hCG_38984A0A1B0GV85 526 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 H0YIZ8 118 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 SLC25A5P05141 298 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 TNFRSF1AP19438 455 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms