RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 UBE2G1P62253 170 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 CENPVQ7Z7K6 275 aaPredicted RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TGIF2LYQ8IUE0 185 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TGIF2LXQ8IUE1 241 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF295-AS1Q8N0V1 137 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF418Q8TF45 676 aaPredicted RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 OR4C12Q96R67 309 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM106BQ9NUM4 274 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 PPIAL4AQ9Y536 164 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 RFPL4AA6NLU0 287 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 RFPL4AL1F8VTS6 287 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM178BH3BS89 294 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 NDUFA2O43678 99 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 RHBDL1O75783 438 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 HLA-DQB1P01920 261 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 OR5I1Q13606 314 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 FAM74A1Q5RGS3 127 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 LRRC75A-AS1Q8N1F1 130 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 MUC20Q8N307 709 aaPredicted RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 UHRF2Q96PU4 802 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 RBFOX1Q9NWB1 397 aaKnown RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 BEX4Q9NWD9 120 aaPredicted RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 C1RLQ9NZP8 487 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 HIST1H1DP16402 221 aaKnown RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 UBE2MP61081 183 aaKnown RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 Q6P435 159 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF826PQ6ZT77 177 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 BIVMQ86UB2 503 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 ZCCHC24Q8N2G6 241 aaKnown RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF561Q8N587 486 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 GCSAMQ8N6F7 178 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 OR51S1Q8NGJ8 323 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 MBD6Q96DN6 1003 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TMPRSS13Q9BYE2 586 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 MFNGO00587 321 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 PDCD6O75340 191 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 CHATP28329 748 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 PRB3Q04118 309 aaPredicted RBP7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 AARDQ4LEZ3 155 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 SSX7Q7RTT5 188 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 OR1L4Q8NGR5 311 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 LINC00052Q96N35 136 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 SRRQ9GZT4 340 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 PARP11Q9NR21 331 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 OOEPA6NGQ2 149 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 MED6O75586 246 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 PTHLHP12272 177 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 FUT3P21217 361 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 NPBWR2P48146 333 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 P2RX3P56373 397 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM267Q0VDI3 215 aaPredicted RBP7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 SPRNQ5BIV9 151 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 LCN15Q6UWW0 184 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 GAPTQ8N292 157 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 OR52L2PQ8NGH6 319 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF488Q96MN9 340 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 GSX2Q9BZM3 304 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 KCNK15Q9H427 330 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 AUNIPQ9H7T9 357 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 THYN1Q9P016 225 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 WIPI2Q9Y4P8 454 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 NUPL2O15504 423 aaKnown RBP7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 HAND1O96004 215 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 GYPAP02724 150 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 DSCR9P59020 149 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM155Q4W5P6 130 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 Q6ZS49 121 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 SMIM4Q8WVI0 70 aa7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF230Q9UIE0 474 aaPredicted RBP7.05□□□□□ -1.28
PTPDC1-201ENST00000288976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 NDUFS8O00217 210 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 TNFRSF13BO14836 293 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SLC31A2O15432 143 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 AADACP22760 399 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 CCR6P51684 374 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF79Q15937 498 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 CLEC12BQ2HXU8 276 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 KCNIP4Q6PIL6 250 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF439Q8NDP4 499 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 MS4A10Q96PG2 267 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 FAAP24Q9BTP7 215 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 KAAG1Q9UBP8 84 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 GEMIN2O14893 280 aaKnown RBP7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 ST8SIA5O15466 376 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 CTXN2P0C2S0 81 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 PPT1P50897 306 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 PIGYQ3MUY2 71 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SFT2D1Q8WV19 159 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 NDFIP1Q9BT67 221 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 OR51J1Q9H342 316 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SLC35D1Q9NTN3 355 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SERTM2A0A1B0GWG4 89 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 HPXP02790 462 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 HTN3P15516 51 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 EGR1P18146 543 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 ORM2P19652 201 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 LCN2P80188 198 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms