RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FAM157CP0CG43 387 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 PPIAL4FP0DN26 164 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 PAX9P55771 341 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 VAMP2P63027 116 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 IZUMO4Q1ZYL8 232 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 EIF5AL1Q6IS14 154 aaKnown RBP8.42□□□□□ -1.06
C9orf43-201ENST00000288462 ODF3L1Q8IXM7 274 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 SPAG16Q8N0X2 631 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 CA5BP1Q8WTZ4 195 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 RNF141Q8WVD5 230 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 TCTEX1D2Q8WW35 142 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 KCNJ16Q9NPI9 418 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 PPIAL4AQ9Y536 164 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 FAM24AA6NFZ4 105 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 A8MXK9 166 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 FAM90A26D6RGX4 464 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 PROP1O75360 226 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 FCN3O75636 299 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 S1PR2O95136 353 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 CLDN14O95500 239 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 GPR12P47775 334 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 NHLH2Q02577 135 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 BAXQ07812 192 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF672Q499Z4 452 aaPredicted RBP8.41□□□□□ -1.06
C9orf43-201ENST00000288462 CLEC9AQ6UXN8 241 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 FGFRL1Q8N441 504 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM252Q8N6L7 170 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF439Q8NDP4 499 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 RAB40CQ96S21 281 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 GINS3Q9BRX5 216 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 CISD1Q9NZ45 108 aaKnown RBP8.41□□□□□ -1.06
C9orf43-201ENST00000288462 GAB2Q9UQC2 676 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 USF3Q68DE3 2245 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 KALRNO60229 2985 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 ANKHD1Q8IWZ3 2542 aaKnown RBP8.41□□□□□ -1.06
C9orf43-201ENST00000288462 BORCS7-ASMTA0A0B4J1R7 106 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 WRBO00258 174 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 CHST1O43916 411 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 ATG12O94817 140 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 NXPH3O95157 252 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 OMGP23515 440 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 DUTP33316 252 aaKnown RBP8.41□□□□□ -1.06
C9orf43-201ENST00000288462 RAB7AP51149 207 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 CAV2P51636 162 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF134P52741 427 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 MEF2CQ06413 473 aaPredicted RBP8.41□□□□□ -1.06
C9orf43-201ENST00000288462 OR2B11Q5JQS5 317 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 ABHD14AQ9BUJ0 271 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 IDI2-AS1Q9NZ38 188 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 SLC25A10Q9UBX3 287 aaPredicted RBP8.41□□□□□ -1.06
C9orf43-201ENST00000288462 LPAR3Q9UBY5 353 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 LINC00312Q9Y6C7 94 aa8.41□□□□□ -1.06
C9orf43-201ENST00000288462 hADV38S2A0JD32 116 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 TOR1AO14656 332 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 SLC31A2O15432 143 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF816Q0VGE8 651 aaPredicted RBP8.4□□□□□ -1.06
C9orf43-201ENST00000288462 MIDNQ504T8 468 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 UTF1Q5T230 341 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.4□□□□□ -1.06
C9orf43-201ENST00000288462 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 CCL17Q92583 94 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 SMIM8Q96KF7 97 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 TAS2R3Q9NYW6 316 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 WSB1Q9Y6I7 421 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 SESN1Q9Y6P5 492 aa8.4□□□□□ -1.06
C9orf43-201ENST00000288462 IGHV1-69-2A0A0G2JMI3 117 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 B8ZZF3 427 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 RBFOX2O43251 390 aaKnown RBP eCLIP8.39□□□□□ -1.07
C9orf43-201ENST00000288462 SYNGR2O43760 224 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 ZP3P21754 424 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 G6PCP35575 357 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 SULT1A2P50226 295 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 CT45A1Q5HYN5 189 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 NCR3LG1Q68D85 454 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 MUC15Q8N387 334 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 OR10A7Q8NGE5 316 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 OR1S2Q8NGQ3 325 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 CT45A3Q8NHU0 189 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 SAT2Q96F10 170 aaPredicted RBP8.39□□□□□ -1.07
C9orf43-201ENST00000288462 C19orf12Q9NSK7 152 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 KAAG1Q9UBP8 84 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 MED19A0JLT2 244 aaPredicted RBP8.39□□□□□ -1.07
C9orf43-201ENST00000288462 M0R1X1 148 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 RAB29O14966 203 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 TXNL1O43396 289 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 SPP1P10451 314 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 NDUFB7P17568 137 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 PPOXP50336 477 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 LINC00205P59089 165 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 TAS2R30P59541 319 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 RPL23AP62750 156 aaKnown RBP8.39□□□□□ -1.07
C9orf43-201ENST00000288462 ZNF273Q14593 569 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
C9orf43-201ENST00000288462 DDB2Q92466 427 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms