RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ETV7Q9Y603 341 aa7.25□□□□□ -1.25
HMGN1-201ENST00000288344 IGHV3-72A0A0B4J1Y9 119 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 SH2D7A6NKC9 451 aaPredicted RBP7.24□□□□□ -1.25
HMGN1-201ENST00000288344 M0QZK8 103 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 FABP7O15540 132 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 TXNL1O43396 289 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 IGKV1D-33P01593 117 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 IGKV1-33P01594 117 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 IGLV1-40P01703 118 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 HLA-DQB1P01920 261 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 ZBTB25P24278 435 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 PNLIPRP3Q17RR3 467 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 ABCA11PQ4W5N1 156 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 LYG1Q8N1E2 194 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 OR2T6Q8NHC8 308 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 ABHD14BQ96IU4 210 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 MRPL20Q9BYC9 149 aaKnown RBP7.24□□□□□ -1.25
HMGN1-201ENST00000288344 ATG5Q9H1Y0 275 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 DCSTAMPQ9H295 470 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 ANAPC10Q9UM13 185 aa7.24□□□□□ -1.25
HMGN1-201ENST00000288344 TMEM235A6NFC5 223 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 H3BS24 57 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 RAB29O14966 203 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 XRCC3O43542 346 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 TUSC2O75896 110 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 RGS11O94810 467 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 NDUFA3O95167 84 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 MOSP00540 346 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 VBP1P61758 197 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 LSM3P62310 102 aaKnown RBP7.23□□□□□ -1.25
HMGN1-201ENST00000288344 CFHR3Q02985 330 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-201ENST00000288344 HNF4GQ14541 408 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 ARL6IP1Q15041 203 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 RPL39P5Q59GN2 51 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 IDNKQ5T6J7 187 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 C10orf99Q6UWK7 81 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 MOB3BQ86TA1 216 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 CROCCP3Q8IVE0 287 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 H1FOOQ8IZA3 346 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-201ENST00000288344 KLHDC1Q8N7A1 406 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 NPBQ8NG41 125 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 OR2T10Q8NGZ9 312 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 CHAC2Q8WUX2 184 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 IL1F10Q8WWZ1 152 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 CMTM3Q96MX0 182 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 S1PR3Q99500 378 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 AUNIPQ9H7T9 357 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 RDH8Q9NYR8 311 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 PIPOXQ9P0Z9 390 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 ZNF580Q9UK33 172 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 MOB4Q9Y3A3 225 aa7.23□□□□□ -1.25
HMGN1-201ENST00000288344 DNAH9Q9NYC9 4486 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 H0YJW9 148 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 SCGNO76038 276 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 LPLP06858 475 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 CD28P10747 220 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 PTHLHP12272 177 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 TMEM11P17152 192 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 NAT1P18440 290 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 SERPINB10P48595 397 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 ARHGDIBP52566 201 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 BRWD1-AS2P59051 145 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 KIR2DS1Q14954 304 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 MRGPRG-AS1Q2M3A8 158 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 C19orf54Q5BKX5 351 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 ZNF383Q8NA42 475 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 OR2AK2Q8NG84 335 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 OR8H1Q8NGG4 311 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 NUDCD2Q8WVJ2 157 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 MAFIPQ8WZ33 124 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 DDB2Q92466 427 aa7.22□□□□□ -1.25
HMGN1-201ENST00000288344 MRPS26Q9BYN8 205 aaKnown RBP7.22□□□□□ -1.25
HMGN1-201ENST00000288344 LIN7CQ9NUP9 197 aaKnown RBP7.22□□□□□ -1.25
HMGN1-201ENST00000288344 ZNF107Q9UII5 783 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-201ENST00000288344 TET2Q6N021 2002 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-201ENST00000288344 TRAV18A0A075B6X5 111 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 IGF1P05019 195 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 CRYGBP07316 175 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 EGR2P11161 476 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-201ENST00000288344 IL3RAP26951 378 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 CNTFRP26992 372 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 SSBP2P81877 361 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-201ENST00000288344 PITPNAQ00169 270 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 KIAA0141Q14154 515 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF660Q6AZW8 331 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-201ENST00000288344 CNIH2Q6PI25 160 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 HOGA1Q86XE5 327 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 LYSMD2Q8IV50 215 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 GVQW1Q8N7I0 195 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-201ENST00000288344 SETD6Q8TBK2 473 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 SNAPC3Q92966 411 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 AKR1E2Q96JD6 320 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 RNF5Q99942 180 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms