RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CLPSP04118 112 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 SCTP09683 121 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 RTL8BQ17RB0 113 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 POM121L2Q96KW2 1035 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 TIMM9Q9Y5J7 89 aa10.83□□□□□ -0.68
SLC6A1-201ENST00000287766 DEDDO75618 318 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 RFPL3SP0C7P2 107 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 TMEM97Q5BJF2 176 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 AQP10Q96PS8 301 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 CARHSP1Q9Y2V2 147 aaKnown RBP10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 C5orf52A6NGY3 159 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 CDIPTO14735 213 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 LDLRAD4O15165 306 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 MEOX1P50221 254 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 UBALD2Q8IYN6 164 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 OR52M1Q8NGK5 317 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 SHANK1Q9Y566 2161 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 PKDREJQ9NTG1 2253 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 IGHV1-45A0A0A0MS14 117 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 H3BVH4 76 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 APCSP02743 223 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 MELTFP08582 738 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 HOXA5P20719 270 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 NMUP48645 174 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 CDCP2Q5VXM1 449 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 PARLQ9H300 379 aa10.82□□□□□ -0.68
SLC6A1-201ENST00000287766 A0A0U1RQV5 110 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 CD8AP01732 235 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 WDFY1Q8IWB7 410 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 OR10X1Q8NGY0 326 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SAP25Q8TEE9 199 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 GDF15Q99988 308 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SH2D2AQ9NP31 389 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 TUBD1Q9UJT1 453 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 MKI67P46013 3256 aaKnown RBP10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 TRGV5A0A0B4J1U4 118 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 IGKV1-9A0A0C4DH69 117 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 CORTO00230 105 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 ZNF735P0CB33 412 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 HIST1H1BP16401 226 aaKnown RBP10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 ORM2P19652 201 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SRSF3P84103 164 aaKnown RBP10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SSPNQ14714 243 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 PCOLCEQ15113 449 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SLC35E4Q6ICL7 350 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 C14orf144Q96I85 54 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 IGHMP01871 453 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SELEP16581 610 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 EGR1P18146 543 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 COX19Q49B96 90 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 OR8I2Q8N0Y5 310 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 OR5A2Q8NGI9 324 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 DNASE2BQ8WZ79 361 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 TMEM230Q96A57 120 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SRSF10O75494 262 aaKnown RBP10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 OPRK1P41145 380 aa10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 SF3B5Q9BWJ5 86 aaKnown RBP10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 CHCHD2Q9Y6H1 151 aaPredicted RBP10.81□□□□□ -0.68
SLC6A1-201ENST00000287766 A0A0G2JMM0 328 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 A0A1W2PPB8 328 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 A0A1W2PRS3 328 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 KIR3DP1A8MWS1 328 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 CA2P00918 260 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 CD40P25942 277 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 GLIPR1P48060 266 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 PSMB2P49721 201 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 OR2T6Q8NHC8 308 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 CDX2Q99626 313 aaPredicted RBP10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TAAR3PQ9P1P4 343 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 H0YIZ8 118 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 HPRT1P00492 218 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 ZNF708P17019 499 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 PET117Q6UWS5 81 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 C12orf54Q6X4T0 127 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 C1orf210Q8IVY1 113 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 MRGPRDQ8TDS7 321 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TINAGQ9UJW2 476 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TMEM30CPA0ZSE6 113 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TRDCB7Z8K6 153 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 RBM11P57052 281 aaKnown RBP10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TRA2AQ13595 282 aaKnown RBP eCLIP10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 LYG1Q8N1E2 194 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 TPRX1Q8N7U7 411 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 NFAM1Q8NET5 270 aaPredicted RBP10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 HSPB8Q9UJY1 196 aa10.8□□□□□ -0.68
SLC6A1-201ENST00000287766 A0A0A6YYD4 124 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 SYNGR1O43759 233 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 PDE6DO43924 150 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 DANCRP0C864 163 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 AGAP20933 346 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 S100A4P26447 101 aaKnown RBP10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 PMS2CLQ68D20 193 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 OR52L2PQ8NGH6 319 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms