RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 GTF3AQ92664 365 aaKnown RBP14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 ZDHHC16Q969W1 377 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 SCN4AP35499 1836 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 ZNF716A6NP11 495 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 LINC00596Q86U02 117 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 NIT1Q86X76 327 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 OR8I2Q8N0Y5 310 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 Q8WTZ3 238 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 PERPQ96FX8 193 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 PTPRFP10586 1907 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 ZNF708P17019 499 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 CEACAM3P40198 252 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 FBXW9Q5XUX1 488 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 DEFB124Q8NES8 71 aa14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 ZCCHC14Q8WYQ9 949 aaKnown RBP14.22□□□□□ -0.13
SH3RF1-201ENST00000284637 SSX8Q7RTT4 187 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 OR2V2Q96R30 315 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 C2orf88Q9BSF0 95 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 LHFPL6Q9Y693 200 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 FGF12P61328 243 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 CEACAM21Q3KPI0 293 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 NPVFQ9HCQ7 196 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 GLRX2Q9NS18 164 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 DNPH1O43598 174 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 CLDN14O95500 239 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 HLA-DQA1P01909 254 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 COL10A1Q03692 680 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 OR1L8Q8NGR8 309 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 OR51B2Q9Y5P1 312 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 AUP1Q9Y679 476 aa14.21□□□□□ -0.13
SH3RF1-201ENST00000284637 TMEM265A0A087WTH1 108 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 CTSBP07858 339 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 PSMB2P49721 201 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 RPL30P62888 115 aaKnown RBP14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 ZNF501Q96CX3 271 aaPredicted RBP14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 SAP30LQ9HAJ7 183 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BKO60814 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BJP06899 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BOP23527 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BBP33778 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 COMPP49747 757 aaPredicted RBP14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BDP58876 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BCP62807 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 SRSF3P84103 164 aaKnown RBP14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST2H2BEQ16778 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 RIPPLY2Q5TAB7 128 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BHQ93079 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BNQ99877 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BMQ99879 126 aa14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 PEF1Q9UBV8 284 aaKnown RBP14.21□□□□□ -0.14
SH3RF1-201ENST00000284637 IGKV1D-42A0A075B6H8 117 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 CRYBA2P53672 197 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 SLC22A18ASQ8N1D0 253 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 MUC15Q8N387 334 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 TAF15Q92804 592 aaKnown RBP eCLIP14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 GPR146Q96CH1 333 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 FAM206AQ9NX38 181 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 DLEU1O43261 78 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 KBTBD11O94819 623 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 IZUMO4Q1ZYL8 232 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 IGKV3-7A0A075B6H7 116 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 LINC00614P0C842 121 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 CLDN16Q9Y5I7 305 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 INSIG2Q9Y5U4 225 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 PGLYRP1O75594 196 aaPredicted RBP14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 SLC25A47Q6Q0C1 308 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 ZNF788Q6ZQV5 615 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 PAXXQ9BUH6 204 aa14.2□□□□□ -0.14
SH3RF1-201ENST00000284637 HBZP02008 142 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 SLC25A28Q96A46 364 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 UQCRFS1P47985 274 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 LCN2P80188 198 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 FOXC1Q12948 553 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 UNC119Q13432 240 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 SNAI3Q3KNW1 292 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 STXBP6Q8NFX7 210 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 G6PC2Q9NQR9 355 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 ZNF71Q9NQZ8 489 aaPredicted RBP14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 C17orf51A8MQB3 221 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 SRP19P09132 144 aaKnown RBP14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 PRDX2P32119 198 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 LAMB2P55268 1798 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 LOC389332A0A1B0GUA5 103 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 PATE3B3GLJ2 98 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 GRAMD2BQ96HH9 432 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 MRPL37Q9BZE1 423 aaKnown RBP14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 RBKSQ9H477 322 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 ZFP30Q9Y2G7 519 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 ZNF638Q14966 1978 aaKnown RBP14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 CEP250Q9BV73 2442 aa14.19□□□□□ -0.14
SH3RF1-201ENST00000284637 GRIFINA4D1Z8 144 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 SRSF9Q13242 221 aaKnown RBP eCLIP14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 FGFRL1Q8N441 504 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 BEND2Q8NDZ0 799 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms