RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 ZNF56Q15929 161 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 CTF1Q16619 201 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 WDR25Q64LD2 544 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 SMIM12Q96EX1 92 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 PARD6AQ9NPB6 346 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 ZIC3O60481 467 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 GLIPR1P48060 266 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 BPIFA4PQ86YQ2 179 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 ZNF703Q9H7S9 590 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 CLDN34H7C241 214 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 SURF2Q15527 256 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 SNAI3Q3KNW1 292 aa12.68□□□□□ -0.38
TRAPPC8-201ENST00000283351 SCTP09683 121 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 H3BTX0 84 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 KLF7O75840 302 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 P2RY1P47900 373 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 PRB3Q04118 309 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 C3orf56Q8N813 242 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 ADIPOR1Q96A54 375 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 STRCQ7RTU9 1775 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 TCRBV4S1A1TA0A5B7 111 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 CXorf1O96002 111 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 GLRXP35754 106 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 CX3CL1P78423 397 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 TRIP11Q15643 1979 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 A0A0U1RQV5 110 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 SNRNP200O75643 2136 aaKnown RBP12.67□□□□□ -0.38
TRAPPC8-201ENST00000283351 OGG1O15527 345 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 CECR9P0C854 216 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 TMEM186Q96B77 213 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 HSPB7Q9UBY9 170 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 KLHDC2Q9Y2U9 406 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 DUXBA0A1W2PPF3 345 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 TO15178 435 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 ZNF253O75346 499 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 FCGR3AP08637 254 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 ADAD2Q8NCV1 583 aaKnown RBP12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 REPIN1Q9BWE0 567 aaKnown RBP12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 NPVFQ9HCQ7 196 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 PHOX2AO14813 284 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 SSX1Q16384 188 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 HIST1H1BP16401 226 aaKnown RBP12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 COLCA1Q6ZS62 124 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 ZNF645Q8N7E2 425 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 ANGPTL6Q8NI99 470 aa12.66□□□□□ -0.38
TRAPPC8-201ENST00000283351 LAMB1P07942 1786 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 TRAV30A0A087WSZ9 112 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 GCGP01275 180 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 ASAH2BP0C7U1 165 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 GALP22466 123 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 ADIPOQQ15848 244 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 TBR1Q16650 682 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 ZNF729A6NN14 1252 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 SUCLG1P53597 346 aaKnown RBP12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 MEGF10Q96KG7 1140 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 QTRT1Q9BXR0 403 aaKnown RBP12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 PCM1Q15154 2024 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 WDFY1Q8IWB7 410 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 SLC25A47Q6Q0C1 308 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 GSX1Q9H4S2 264 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC8-201ENST00000283351 IGHV3OR16-8A0A075B7F1 116 aa12.65□□□□□ -0.39
TRAPPC8-201ENST00000283351 VKORC1L1Q8N0U8 176 aa12.65□□□□□ -0.39
TRAPPC8-201ENST00000283351 NEURL2Q9BR09 285 aa12.65□□□□□ -0.39
TRAPPC8-201ENST00000283351 PRSS22Q9GZN4 317 aa12.65□□□□□ -0.39
TRAPPC8-201ENST00000283351 SLC35B3Q9H1N7 401 aa12.65□□□□□ -0.39
TRAPPC8-201ENST00000283351 DLL3Q9NYJ7 618 aa12.65□□□□□ -0.39
TRAPPC8-201ENST00000283351 COL22A1Q8NFW1 1626 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 ANKRD20A5PA0PJZ0 165 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 OR5AU1Q8NGC0 362 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 SCMH1Q96GD3 660 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 TDRD6O60522 2096 aaKnown RBP12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 OR4C46A6NHA9 309 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 PXMP4Q9Y6I8 212 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 A0A1W2PP11 408 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 EFEMP2O95967 443 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 EWSR1Q01844 656 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 TEX261Q6UWH6 196 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 ARL6IP6Q8N6S5 226 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 PGPA6NDG6 321 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 PROB1E7EW31 1015 aa12.64□□□□□ -0.39
TRAPPC8-201ENST00000283351 PRSS27Q9BQR3 290 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms