RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TMEFF2Q9UIK5 374 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PPIAL4CA0A0B4J2A2 164 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 NPIPB13A6NJU9 1138 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 NPIPB4C9JG80 1138 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CLDN14O95500 239 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ADRA2AP08913 450 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 LINC00869P0C866 280 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PPIAL4GP0DN37 164 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CEACAM1P13688 526 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 SUMO2P61956 95 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PSG6Q00889 435 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 C11orf91Q3C1V1 193 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 MESTQ5EB52 335 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ABLIM2Q6H8Q1 611 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 MRPL54Q6P161 138 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 C9orf40Q8IXQ3 194 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 NRIP2Q9BQI9 281 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PEMTQ9UBM1 199 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CEP295Q9C0D2 2601 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CD5P06127 495 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 RPL29P47914 159 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 UCP2P55851 309 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 DLX6P56179 175 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF146Q15072 292 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 FAM27D1Q5T7N8 215 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 HOGA1Q86XE5 327 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 OR8A1Q8NGG7 326 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 GPR82Q96P67 336 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 MRPL32Q9BYC8 188 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 RALYQ9UKM9 306 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 BGLAPP02818 100 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 UCP3P55916 312 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PLPPR5Q32ZL2 321 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 NRN1LQ496H8 165 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CFAP161Q6P656 301 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 LRRC75AQ8NAA5 344 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 TBX15Q96SF7 602 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 TMEM140Q9NV12 185 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CALYQ9NYX4 217 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 FN1P02751 2386 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 HOXA3O43365 443 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PRSS2P07478 247 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 COL9A1P20849 921 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 AANATQ16613 207 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 OR4B1Q8NGF8 309 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 DYRK2Q92630 601 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 C12orf57Q99622 126 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 METTL1Q9UBP6 276 aaKnown RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 TUBD1Q9UJT1 453 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CACNA1SQ13698 1873 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CDK5RAP2Q96SN8 1893 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 MED12Q93074 2177 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 A0A1B0GUL6 1792 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ADAMTS7Q9UKP4 1686 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 MARCH11A6NNE9 402 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PEX11BO96011 259 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 Q6AWC8 147 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 SCMH1Q96GD3 660 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CCL13Q99616 98 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CCL28Q9NRJ3 127 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 PRR19A6NJB7 356 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 CMC4P56277 68 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 TCL1AP56279 114 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 SEZ6L2Q6UXD5 910 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 FAM90A1Q86YD7 464 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 NEU4Q8WWR8 484 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-201ENST00000283254 KCNE5Q9UJ90 142 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 JPT1Q9UK76 154 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 LTBP4Q8N2S1 1624 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 TNCP24821 2201 aa3.53□□□□□ -1.84
SCN3A-201ENST00000283254 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 IFITM10A6NMD0 228 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 SNURFLB1AK76 121 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 OR11H12B2RN74 326 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 CTDSPLO15194 276 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 ISG15P05161 165 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 IGHV4-34P06331 123 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 ANOS1P23352 680 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 CKS2P33552 79 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 RND2P52198 227 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 POLR2GP62487 172 aaKnown RBP eCLIP3.53□□□□□ -1.85
SCN3A-201ENST00000283254 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 FAM159AQ6UWV7 190 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 DTX1Q86Y01 620 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 OR11H1Q8NG94 326 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 OR11H2Q8NH07 326 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 SSC4DQ8WTU2 575 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 FAM168AQ92567 244 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 ZNF501Q96CX3 271 aaPredicted RBP3.53□□□□□ -1.85
SCN3A-201ENST00000283254 MAP1LC3AQ9H492 121 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 SLC6A13Q9NSD5 602 aa3.53□□□□□ -1.85
SCN3A-201ENST00000283254 TRIP12Q14669 1992 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-201ENST00000283254 TRAV34A0A0B4J273 112 aa3.52□□□□□ -1.85
SCN3A-201ENST00000283254 PAX1P15863 534 aa3.52□□□□□ -1.85
SCN3A-201ENST00000283254 FGF8P55075 233 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-201ENST00000283254 DSCR9P59020 149 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms