RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ST6GAL2Q96JF0 529 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 ZNF300Q96RE9 604 aaPredicted RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 RNF126Q9BV68 326 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 MS4A8Q9BY19 250 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 C20orf85Q9H1P6 137 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 ABCG5Q9H222 651 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 DDX31Q9H8H2 851 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 TPT1P8Q9HAU6 139 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 LRTM1Q9HBL6 345 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 ZNF71Q9NQZ8 489 aaPredicted RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 SNX12Q9UMY4 172 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 USP24Q9UPU5 2620 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 VSIG4Q9Y279 399 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 UTP11Q9Y3A2 253 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 V9GY05 133 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 LAMA5O15230 3695 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 CHD8Q9HCK8 2581 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 LRRK1Q38SD2 2015 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 PHF3Q92576 2039 aaKnown RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 LRP4O75096 1905 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 MYLKQ15746 1914 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SPEGQ15772 3267 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 IGLV1-36A0A0B4J1U3 117 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 A0A0B4J2A0 478 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 A0A0G2JRQ6 117 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 PQLC2LA1A4F0 135 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 G3V2L1 256 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 K7EQD1 137 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 TXNDC9O14530 226 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 HCRTR1O43613 425 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 NPIPB7O75200 414 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 REM1O75628 298 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 KLF7O75840 302 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 SULT1C4O75897 302 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 NXPH4O95158 308 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 MMP7P09237 267 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 OR5G3P0C626 314 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 GKN3PP0CG01 181 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 MPC1LP0DKB6 136 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SULT1A3P0DMM9 295 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SULT1A4P0DMN0 295 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ERGP11308 486 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 CD79AP11912 226 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 GABRA1P14867 456 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ZNF708P17019 499 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 MYL9P24844 172 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 S100PP25815 95 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 CMPK1P30085 196 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 PEBP1P30086 187 aaKnown RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 AKR1C3P42330 323 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ZNF133P52736 654 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 RIPPLY3P57055 190 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 RHOBP62745 196 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SLC35A2P78381 396 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 EMX1Q04741 257 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 TMEM128Q5BJH2 165 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 TTC32Q5I0X7 151 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SPANXN3Q5MJ09 141 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 CLEC12AQ5QGZ9 265 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 AVPI1Q5T686 147 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ANKRD22Q5VYY1 191 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ELP2Q6IA86 826 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 OPN5Q6U736 354 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 TOMM20LQ6UXN7 152 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SLC16A13Q7RTY0 426 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 C9orf40Q8IXQ3 194 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 C6orf223Q8N319 242 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ZNF614Q8N883 585 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 LINC01555Q8NAE3 123 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 OR10G7Q8NGN6 311 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 NRTNQ99748 197 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 MARVELD1Q9BSK0 173 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 MROQ9BYG7 248 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 OR51E2Q9H255 320 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ISG20L2Q9H9L3 353 aaKnown RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 RASL12Q9NYN1 266 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 PCYOX1Q9UHG3 505 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 SHPKQ9UHJ6 478 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 ZNF223Q9UK11 482 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 IGF2RP11717 2491 aa3.56□□□□□ -1.84
CD44-202ENST00000278385 TP53BP1Q12888 1972 aaPredicted RBP3.56□□□□□ -1.84
CD44-202ENST00000278385 FAM208BQ5VWN6 2430 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 UNC13CQ8NB66 2214 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 SHROOM3Q8TF72 1996 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 ANKRD36A6QL64 1941 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 TRAV39A0A0B4J263 110 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 A0A1B0GX78 115 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 A0A1W2PS18 150 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 C12orf77C9JDV5 145 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 ORC5O43913 435 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 EIF4EP06730 217 aaKnown RBP3.55□□□□□ -1.84
CD44-202ENST00000278385 C8GP07360 202 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 COX4I1P13073 169 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 CD34P28906 385 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 RCVRNP35243 200 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 CTRLP40313 264 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 GNG11P61952 73 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 HBG1P69891 147 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 HBG2P69892 147 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms