RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
SKP2-201ENST00000274254 FN1P02751 2386 aaKnown RBP13.91□□□□□ -0.18
SKP2-201ENST00000274254 A0A0U1RQK1 487 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 OOSP1A8MZH6 123 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 SRP14P37108 136 aaKnown RBP13.9□□□□□ -0.18
SKP2-201ENST00000274254 DEFA1P59665 94 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 DEFA3P59666 94 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 ZNF816Q0VGE8 651 aaPredicted RBP13.9□□□□□ -0.18
SKP2-201ENST00000274254 SSX2Q16385 188 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 TUSC1Q2TAM9 212 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 LPCAT3Q6P1A2 487 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 ZNF818PQ6ZRF7 136 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 SLC38A6Q8IZM9 456 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 BCL6BQ8N143 479 aaPredicted RBP13.9□□□□□ -0.18
SKP2-201ENST00000274254 BVESQ8NE79 360 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 MARCH1Q8TCQ1 289 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 RTN4IP1Q8WWV3 396 aaPredicted RBP13.9□□□□□ -0.18
SKP2-201ENST00000274254 AKR1E2Q96JD6 320 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 S1PR3Q99500 378 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 SLC25A21Q9BQT8 299 aaPredicted RBP13.9□□□□□ -0.18
SKP2-201ENST00000274254 HILPDAQ9Y5L2 63 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 MXRA5Q9NR99 2828 aa13.9□□□□□ -0.18
SKP2-201ENST00000274254 GAPDHP04406 335 aaKnown RBP13.9□□□□□ -0.19
SKP2-201ENST00000274254 BAMBIQ13145 260 aa13.9□□□□□ -0.19
SKP2-201ENST00000274254 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.19
SKP2-201ENST00000274254 RBMS2Q15434 407 aaKnown RBP13.9□□□□□ -0.19
SKP2-201ENST00000274254 MZT2BQ6NZ67 158 aa13.9□□□□□ -0.19
SKP2-201ENST00000274254 ZBTB34Q8NCN2 500 aa13.9□□□□□ -0.19
SKP2-201ENST00000274254 GPR132Q9UNW8 380 aa13.9□□□□□ -0.19
SKP2-201ENST00000274254 A0A1W2PPI3 338 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 INAFM1C9JVW0 142 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 GPR31O00270 319 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 TXNL1O43396 289 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 NDUFB6O95139 128 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 PGAM2P15259 253 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 PAX6P26367 422 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 REG1BP48304 166 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 PLA1AQ53H76 456 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 CCDC144NLQ6NUI1 221 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 TGIF2LXQ8IUE1 241 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 OR8H3Q8N146 312 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 POC5Q8NA72 575 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 ZFAND1Q8TCF1 268 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 C22orf15Q8WYQ4 148 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 ZNF486Q96H40 463 aaPredicted RBP13.89□□□□□ -0.19
SKP2-201ENST00000274254 BEX2Q9BXY8 128 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 MEGF9Q9H1U4 602 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 VSIG4Q9Y279 399 aa13.89□□□□□ -0.19
SKP2-201ENST00000274254 IGHV1-3A0A0C4DH29 117 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 M0R1X1 148 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 CTSDP07339 412 aaPredicted RBP13.88□□□□□ -0.19
SKP2-201ENST00000274254 FBP1P09467 338 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 ZDHHC22Q8N966 263 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 SCGB3A2Q96PL1 93 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 RTBDNQ9BSG5 229 aaPredicted RBP13.88□□□□□ -0.19
SKP2-201ENST00000274254 MRPL20Q9BYC9 149 aaKnown RBP13.88□□□□□ -0.19
SKP2-201ENST00000274254 C5orf66Q9H5L9 145 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
SKP2-201ENST00000274254 CT45A6P0DMU7 189 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 CT45A5P0DMU8 189 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 CT45A7P0DMV0 189 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 PI3P19957 117 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 DUTP33316 252 aaKnown RBP13.87□□□□□ -0.19
SKP2-201ENST00000274254 HABP2Q14520 560 aaPredicted RBP13.87□□□□□ -0.19
SKP2-201ENST00000274254 DEFB112Q30KQ8 113 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 CMTM1Q8IZ96 169 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 DRAXINQ8NBI3 349 aaPredicted RBP13.87□□□□□ -0.19
SKP2-201ENST00000274254 NABP2Q9BQ15 211 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 DPAGT1Q9H3H5 408 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 PRDM13Q9H4Q3 707 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 SLC2A9Q9NRM0 540 aa13.87□□□□□ -0.19
SKP2-201ENST00000274254 TEP1Q99973 2627 aaKnown RBP13.86□□□□□ -0.19
SKP2-201ENST00000274254 FAM240BA0A1B0GVZ2 78 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 VGLL3A8MV65 326 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 PGLYRP1O75594 196 aaPredicted RBP13.86□□□□□ -0.19
SKP2-201ENST00000274254 SRD5A1P18405 259 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 LINC00205P59089 165 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 RND3P61587 244 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 PHLDA2Q53GA4 152 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 ZNF66Q6ZN08 573 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 NRARPQ7Z6K4 114 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 CFHR4Q92496 578 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 GPHA2Q96T91 129 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 HSD17B10Q99714 261 aaKnown RBP13.86□□□□□ -0.19
SKP2-201ENST00000274254 OCEL1Q9H607 264 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 COPZ2Q9P299 210 aa13.86□□□□□ -0.19
SKP2-201ENST00000274254 MDFIC2A0A1B0GVS7 189 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 LINC00473A8K010 186 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 TIMM23O14925 209 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 TNFSF12O43508 249 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 TCRBP04435 133 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 DYNLT3P51808 116 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 PIGPP57054 158 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 RPL30P62888 115 aaKnown RBP13.85□□□□□ -0.19
SKP2-201ENST00000274254 DUSP18Q8NEJ0 188 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 OR5AN1Q8NGI8 311 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 DDB2Q92466 427 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 ADTRPQ96IZ2 230 aa13.85□□□□□ -0.19
SKP2-201ENST00000274254 ZNF48Q96MX3 618 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms