RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 OR4X1Q8NH49 305 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 PHYHIPLQ96FC7 376 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 TECRQ9NZ01 308 aaKnown RBP11.71□□□□□ -0.54
NPC1-201ENST00000269228 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.54
NPC1-201ENST00000269228 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.54
NPC1-201ENST00000269228 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 CLRN3Q8NCR9 226 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 PGLYRP1O75594 196 aaPredicted RBP11.7□□□□□ -0.54
NPC1-201ENST00000269228 SSTR5P35346 364 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 OR4P4Q8NGL7 312 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
NPC1-201ENST00000269228 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
NPC1-201ENST00000269228 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 ZMAT5Q9UDW3 170 aaKnown RBP11.7□□□□□ -0.54
NPC1-201ENST00000269228 LEUTXA8MZ59 168 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 G3V3Q6 166 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 ZNF362Q5T0B9 420 aaPredicted RBP11.7□□□□□ -0.54
NPC1-201ENST00000269228 C4orf17Q53FE4 359 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 MYPOPQ86VE0 399 aaPredicted RBP11.7□□□□□ -0.54
NPC1-201ENST00000269228 PDPNQ86YL7 162 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 PARD6AQ9NPB6 346 aa11.7□□□□□ -0.54
NPC1-201ENST00000269228 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 LIPFP07098 398 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 RNF151Q2KHN1 245 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 RNASE6Q93091 150 aaKnown RBP11.69□□□□□ -0.54
NPC1-201ENST00000269228 RNF2Q99496 336 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 MUC1P15941 1255 aaPredicted RBP11.69□□□□□ -0.54
NPC1-201ENST00000269228 GNG4P50150 75 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 B2MP61769 119 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 PSG5Q15238 335 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 DCAF12L2Q5VW00 463 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 TMEM208Q9BTX3 173 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 C7orf66A4D0T2 115 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 ZNF729A6NN14 1252 aaPredicted RBP11.69□□□□□ -0.54
NPC1-201ENST00000269228 H0YL77 283 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 SLC25A17O43808 307 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 NTF3P20783 257 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 SLC24A4Q8NFF2 622 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 CLCF1Q9UBD9 225 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 ASPHD2Q6ICH7 369 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 ACP7Q6ZNF0 438 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 PNKDQ8N490 385 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 PERPQ96FX8 193 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 JPT1Q9UK76 154 aa11.69□□□□□ -0.54
NPC1-201ENST00000269228 KCNAB3O43448 404 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 MBPP02686 304 aaPredicted RBP11.68□□□□□ -0.54
NPC1-201ENST00000269228 FOXF2Q12947 444 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 KLHDC3Q9BQ90 382 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 CLPSP04118 112 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 TSC2P49815 1807 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 SMIM17P0DL12 118 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
NPC1-201ENST00000269228 UNC119Q13432 240 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 TMEM241Q24JQ0 296 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 UQCC3Q6UW78 93 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 P2RX4Q99571 388 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 NAGKQ9UJ70 344 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 MUC6Q6W4X9 2439 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 FREM3P0C091 2139 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 NHLH2Q02577 135 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 FGFRL1Q8N441 504 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 FAM216BQ8N7L0 139 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 TMEM167BQ9NRX6 74 aa11.68□□□□□ -0.54
NPC1-201ENST00000269228 E9PLN8 166 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 MFNGO00587 321 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 C10orf113Q5VZT2 155 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 VKORC1Q9BQB6 163 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 TLNRD1Q9H1K6 362 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 SLC35B3Q9H1N7 401 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 ZDHHC11Q9H8X9 412 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 P2RY4P51582 365 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 LY6EQ16553 131 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 GGNQ86UU5 652 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 MMD2Q8IY49 270 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 LILRB1Q8NHL6 650 aaPredicted RBP11.67□□□□□ -0.54
NPC1-201ENST00000269228 FAM222BQ8WU58 562 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 RSRP1Q9BUV0 290 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
NPC1-201ENST00000269228 SPINK4O60575 86 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 PF4V1P10720 104 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 FOXG1P55316 489 aaPredicted RBP11.67□□□□□ -0.54
NPC1-201ENST00000269228 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
NPC1-201ENST00000269228 PTPRDP23468 1912 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 FOXH1O75593 365 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 C9orf62Q8N4C0 152 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 TCTEX1D1Q8N7M0 179 aa11.67□□□□□ -0.54
NPC1-201ENST00000269228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.66□□□□□ -0.54
NPC1-201ENST00000269228 ZNF385CQ66K41 422 aaPredicted RBP11.66□□□□□ -0.54
NPC1-201ENST00000269228 ZIC4Q8N9L1 334 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms