RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KIAA1644Q3SXP7 199 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 OR4A47Q6IF82 309 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 TUSC5Q8IXB3 177 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 OR10V1Q8NGI7 309 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 LYZL4Q96KX0 146 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 NRN1Q9NPD7 142 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 IGHV1OR21-1A0A087WYE8 117 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 C2orf72A6NCS6 295 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 PLPP3O14495 311 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 SPRY1O43609 319 aaPredicted RBP7.47□□□□□ -1.21
VAPB-201ENST00000265619 CELA3BP08861 270 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 IAPPP10997 89 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 CRISP2P16562 243 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 PMCHP20382 165 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 DTYMKP23919 212 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 RHOGP84095 191 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 BAXQ07812 192 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 FOXE3Q13461 319 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 BAGE3Q86Y29 109 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 BAGE2Q86Y30 109 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 ZDHHC23Q8IYP9 409 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 OR1K1Q8NGR3 316 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 CORO2AQ92828 525 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 NAPSAO96009 420 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 GPX1P07203 203 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 C3orf79P0CE67 100 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 FCGR2AP12318 317 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 SELENOVP59797 346 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 PPP1CBP62140 327 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 PAFAH1B2P68402 229 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 ID3Q02535 119 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 SLAQ13239 276 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 SGCBQ16585 318 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 TBC1D26Q86UD7 250 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 OR1L3Q8NH93 324 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 ZNF721Q8TF20 911 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 TMEM204Q9BSN7 226 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 SPXQ9BT56 116 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 GNB4Q9HAV0 340 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 POLR1DQ9Y2S0 133 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 ASPMQ8IZT6 3477 aa7.46□□□□□ -1.21
VAPB-201ENST00000265619 TPRP12270 2363 aaKnown RBP7.46□□□□□ -1.22
VAPB-201ENST00000265619 TRBV20OR9-2A0A075B6H5 130 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 DUXBA0A1W2PPF3 345 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 SERPINE3A8MV23 424 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 RER1O15258 196 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 MPPED1O15442 326 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 PAGE4O60829 102 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 CLPSP04118 112 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 SLC35E2P0CK97 266 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 GNRHRP30968 328 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 ARG2P78540 354 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 CCL7P80098 99 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 ARL6IP1Q15041 203 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 PRTGQ2VWP7 1150 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.46□□□□□ -1.22
VAPB-201ENST00000265619 PLXDC1Q8IUK5 500 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 C1orf210Q8IVY1 113 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 UBALD2Q8IYN6 164 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 CITED1Q99966 193 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 TMEM222Q9H0R3 208 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 ARRDC1-AS1Q9H2J1 176 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 BET1LQ9NYM9 111 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 IGHV2-26A0A0B4J1V2 119 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 ZNF816-ZNF321PA0A0X1KG74 233 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 OR6C6A6NF89 314 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 MS4A18H0YCH9 400 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 SLC17A3O00476 420 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 MLNRO43193 412 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
VAPB-201ENST00000265619 IGLV3-19P01714 112 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 IGHG1P01857 330 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 CFHR1Q03591 330 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 MS4A18Q3C1V0 323 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 Q6ZRM9 215 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 SPATA12Q7Z6I5 190 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
VAPB-201ENST00000265619 LYRM4Q9HD34 91 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 NECAP2Q9NVZ3 263 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 RARRES3Q9UL19 164 aa7.46□□□□□ -1.22
VAPB-201ENST00000265619 TRAV36DV7A0A075B6V5 113 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 SPINK4O60575 86 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ESDP10768 282 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 NPBWR2P48146 333 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ZXDAP98168 799 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 HLA-DRB5Q30154 266 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 MPV17L2Q567V2 206 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 NMSQ5H8A3 153 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ZNF695Q8IW36 515 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 CACNA1DQ01668 2161 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ESPL1Q14674 2120 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 RAB29O14966 203 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 UTS2O95399 124 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 GATA2P23769 480 aaPredicted RBP7.45□□□□□ -1.22
VAPB-201ENST00000265619 FASLGP48023 281 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 RPS16P62249 146 aaKnown RBP7.45□□□□□ -1.22
VAPB-201ENST00000265619 LCN2P80188 198 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 PMP22Q01453 160 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms