RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 OR9G1Q8NH87 305 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 J3QR06 171 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 VENTXO95231 258 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 MECP2P51608 486 aaKnown RBP14.85□□□□□ -0.03
SDF4-201ENST00000263741 RBMS2Q15434 407 aaKnown RBP14.85□□□□□ -0.03
SDF4-201ENST00000263741 PNLIPRP3Q17RR3 467 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 IGSF11Q5DX21 431 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 ZNF418Q8TF45 676 aaPredicted RBP14.85□□□□□ -0.03
SDF4-201ENST00000263741 DNAJC9-AS1A6NH13 148 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 TRDCB7Z8K6 153 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 SHOXO15266 292 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 HOXA3O43365 443 aaPredicted RBP14.84□□□□□ -0.03
SDF4-201ENST00000263741 MELTFP08582 738 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 FBP1P09467 338 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 ZNF134P52741 427 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 DHODHQ02127 395 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 DIAPH2-AS1Q14236 149 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 RBMS3Q6XE24 437 aaKnown RBP14.84□□□□□ -0.03
SDF4-201ENST00000263741 UXS1Q8NBZ7 420 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 OR52M1Q8NGK5 317 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 SEC22CQ9BRL7 303 aa14.84□□□□□ -0.03
SDF4-201ENST00000263741 TCF21O43680 179 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 IGHV4-59P01825 116 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 HTR1DP28221 377 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 COMMD7Q86VX2 200 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 ZNF439Q8NDP4 499 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 ZNF596Q8TC21 504 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 CHIAQ9BZP6 476 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 JPT1Q9UK76 154 aa14.83□□□□□ -0.03
SDF4-201ENST00000263741 BET1O15155 118 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 M6PRP20645 277 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 DTYMKP23919 212 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 HTD2P86397 168 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 SSBP1Q04837 148 aaKnown RBP14.83□□□□□ -0.04
SDF4-201ENST00000263741 BAMBIQ13145 260 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 MORN2Q502X0 79 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 ZDHHC22Q8N966 263 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 BEND2Q8NDZ0 799 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 RAB9BQ9NP90 201 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 MTFP1Q9UDX5 166 aa14.83□□□□□ -0.04
SDF4-201ENST00000263741 TBL2Q9Y4P3 447 aaKnown RBP14.83□□□□□ -0.04
SDF4-201ENST00000263741 BUB1B-PAK6H3BSN5 160 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 L7N2F9 121 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 PRRX1P54821 245 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 HILS1P60008 231 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 CT45A1Q5HYN5 189 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 Q6YL49 198 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 OR10X1Q8NGY0 326 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 CT45A3Q8NHU0 189 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 LRRC20Q8TCA0 184 aa14.82□□□□□ -0.04
SDF4-201ENST00000263741 HSPA12AO43301 675 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 IFNA2P01563 188 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 RAB13P51153 203 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 I3L521 148 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 MPC2O95563 127 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 ANXA7P20073 488 aaKnown RBP14.81□□□□□ -0.04
SDF4-201ENST00000263741 KIR2DS4P43632 304 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 REG1BP48304 166 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 KIR2DS1Q14954 304 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 OPCMLQ14982 345 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 OR4A4PQ8NGN8 299 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 ASB13Q8WXK3 278 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 RBMXL1Q96E39 390 aaKnown RBP14.81□□□□□ -0.04
SDF4-201ENST00000263741 GINS4Q9BRT9 223 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 ABHD14AQ9BUJ0 271 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 DPM3Q9P2X0 92 aa14.81□□□□□ -0.04
SDF4-201ENST00000263741 RPS10-NUDT3A0A1W2PQS6 291 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 G3V3Q6 166 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 ST8SIA5O15466 376 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 AKAIN1P0CW23 69 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 ACTBP60709 375 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 ACTG1P63261 375 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 SLC9A3R2Q15599 337 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 TMEM30BQ3MIR4 351 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 TPTE2P1Q5T6R2 138 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 MINOS1Q5TGZ0 78 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 TAF15Q92804 592 aaKnown RBP eCLIP14.8□□□□□ -0.04
SDF4-201ENST00000263741 MINOS1-NBL1R4GNA1 71 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 FBN1P35555 2871 aaKnown RBP14.8□□□□□ -0.04
SDF4-201ENST00000263741 H3BUX3 64 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 OR2A4O95047 310 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 CEACAM6P40199 344 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 FAAP20Q6NZ36 180 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 IDO2Q6ZQW0 420 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 SLC25A48Q6ZT89 311 aaKnown RBP14.8□□□□□ -0.04
SDF4-201ENST00000263741 LDLRAD3Q86YD5 345 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 MALSU1Q96EH3 234 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 OR2A7Q96R45 310 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 SSX3Q99909 188 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 CABLES2Q9BTV7 478 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 PRDM13Q9H4Q3 707 aa14.8□□□□□ -0.04
SDF4-201ENST00000263741 POM121CA8CG34 1229 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 LY6LH3BQJ8 138 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 YPEL1O60688 119 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 RGS11O94810 467 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 ZBTB25P24278 435 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 CD24P25063 80 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 PRSS3P35030 304 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 RIPPLY3P57055 190 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 LY6EQ16553 131 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms