RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CLN8Q9UBY8 286 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 MFAP2P55001 183 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 VCX2Q9H322 139 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 SOX21Q9Y651 276 aaPredicted RBP15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 TANC2Q9HCD6 1990 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 HIKESHIQ53FT3 197 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 KLK13Q9UKR3 277 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 BGLAPP02818 100 aa15.21■□□□□ 0.02
NOTCH3-201ENST00000263388 VSIG8P0DPA2 414 aa15.21■□□□□ 0.02
NOTCH3-201ENST00000263388 SPEM2Q0P670 501 aa15.21■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF441Q8N8Z8 693 aa15.21■□□□□ 0.02
NOTCH3-201ENST00000263388 DEFB124Q8NES8 71 aa15.21■□□□□ 0.02
NOTCH3-201ENST00000263388 PRSS8Q16651 343 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 ERVFRD-1P60508 538 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 C1QL3Q5VWW1 255 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 ADAMTS17Q8TE56 1095 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 TINAGQ9UJW2 476 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 PLXNB3Q9ULL4 1909 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 KCNK7Q9Y2U2 307 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 MEF2BQ02080 365 aaPredicted RBP15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 GAB4Q2WGN9 574 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 PLPPR5Q32ZL2 321 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 FSTP19883 344 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 OVCH2Q7RTZ1 564 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 P2RX4Q99571 388 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 CXorf65A6NEN9 183 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 COMPP49747 757 aaPredicted RBP15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 OR4A5Q8NH83 315 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 METTL26Q96S19 204 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 UBTD1Q9HAC8 227 aa15.2■□□□□ 0.02
NOTCH3-201ENST00000263388 CEACAM18A8MTB9 384 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 HRKO00198 91 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 LGALS3P17931 250 aaKnown RBP15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 RPP25Q9BUL9 199 aaKnown RBP15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 HSF4Q9ULV5 492 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 C7orf66A4D0T2 115 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 CKS2P33552 79 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 MAS1LP35410 378 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 SELENOTP62341 195 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 LEMD1Q68G75 181 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 HYPMO75409 117 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 HLA-DQA1P01909 254 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 C1QAP02745 245 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 ISG15P05161 165 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 TMEM91Q6ZNR0 172 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 C11orf68Q9H3H3 251 aaKnown RBP15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 A0A1W2PPV9 198 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 APELAP0DMC3 54 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 CEACAM21Q3KPI0 293 aa15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 RCC1P18754 421 aaPredicted RBP15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF784Q8NCA9 323 aaPredicted RBP15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 PTPMT1Q8WUK0 201 aaPredicted RBP15.19■□□□□ 0.02
NOTCH3-201ENST00000263388 COL9A1P20849 921 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 C9orf40Q8IXQ3 194 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 UCN2Q96RP3 112 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 SIP14410 1827 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 FCGR3AP08637 254 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 CCL3P10147 92 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 WNT5AP41221 380 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 ZP4Q12836 540 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 MRPS18BQ9Y676 258 aaKnown RBP15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 FGF12P61328 243 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 COL10A1Q03692 680 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 PXMP4Q9Y6I8 212 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 RGP1Q92546 391 aaPredicted RBP15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 PRSS12P56730 875 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 FAM27BQ5VT28 67 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 TMEM183AQ8IXX5 376 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF714Q96N38 554 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 AUP1Q9Y679 476 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 LRRC75BQ2VPJ9 315 aa15.18■□□□□ 0.02
NOTCH3-201ENST00000263388 MGAT2Q10469 447 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF71Q9NQZ8 489 aaPredicted RBP15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 IGKV3-7A0A075B6H7 116 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 CDX1P47902 265 aaPredicted RBP15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 MMDQ15546 238 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 IBA57Q5T440 356 aaKnown RBP15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 BEND2Q8NDZ0 799 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 ECSCRQ19T08 205 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 TEX30Q5JUR7 227 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 LSM10Q969L4 123 aaKnown RBP15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 OR10J6PQ8NGY7 276 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 ELF5Q9UKW6 265 aaPredicted RBP15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 IGHV3OR15-7A0A075B7D8 119 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 C16orf97H3BN30 126 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 EML2O95834 649 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 WFIKKN1Q96NZ8 548 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 HSPB1P04792 205 aaKnown RBP15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 TMEM78Q5T7P6 136 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF721Q8TF20 911 aa15.17■□□□□ 0.02
NOTCH3-201ENST00000263388 MUC1P15941 1255 aaPredicted RBP15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 MC5RP33032 325 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 STPG3Q8N7X2 389 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF205O95201 554 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 C1orf53Q5VUE5 145 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 TMEM222Q9H0R3 208 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 MDP1Q86V88 176 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 DUSP15Q9H1R2 295 aaPredicted RBP15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 PRDX2P32119 198 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 ROM1Q03395 351 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms