RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 FAM3BP58499 235 aaPredicted RBP13.9□□□□□ -0.18
ZNF541-201ENST00000263351 GNB2P62879 340 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 PARLQ9H300 379 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 CACNA1GO43497 2377 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 ATMQ13315 3056 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 NDUFB7P17568 137 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 CHRNA7P36544 502 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 PLGLB1Q02325 96 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 C6orf15Q6UXA7 325 aaPredicted RBP13.9□□□□□ -0.18
ZNF541-201ENST00000263351 ZNF573Q86YE8 665 aa13.9□□□□□ -0.18
ZNF541-201ENST00000263351 BOKQ9UMX3 212 aaPredicted RBP13.9□□□□□ -0.18
ZNF541-201ENST00000263351 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 ODAMA1E959 279 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 NXPH2O95156 264 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 SYNGR4O95473 234 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 HNF1AP20823 631 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 MEF2BQ02080 365 aaPredicted RBP13.89□□□□□ -0.19
ZNF541-201ENST00000263351 PLP2Q04941 152 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 ZNF497Q6ZNH5 498 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 POM121Q96HA1 1249 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 IL17BQ9UHF5 180 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 C9orf172C9J069 976 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 PAGE4O60829 102 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 CYC1P08574 325 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 SRSF7Q16629 238 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZNF541-201ENST00000263351 FAM234AQ9H0X4 552 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 CDH20Q9HBT6 801 aa13.89□□□□□ -0.19
ZNF541-201ENST00000263351 A0A087X0M5 115 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 A0A1B0GX30 115 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 PFN1P07737 140 aaKnown RBP13.88□□□□□ -0.19
ZNF541-201ENST00000263351 S100GP29377 79 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 SSTR5P35346 364 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 TNFRSF9Q07011 255 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 RNFT1Q5M7Z0 435 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 MRGPRGQ86SM5 289 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 MRGPRDQ8TDS7 321 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 FUT9Q9Y231 359 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 TRAV38-1A0A0B4J264 116 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 ZNF705GA8MUZ8 300 aaPredicted RBP13.88□□□□□ -0.19
ZNF541-201ENST00000263351 RBMXL2O75526 392 aaKnown RBP13.88□□□□□ -0.19
ZNF541-201ENST00000263351 LYZL6O75951 148 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 CD33P20138 364 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 FGF7P21781 194 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 DDTP30046 118 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 ZNF66Q6ZN08 573 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 GPR87Q9BY21 358 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 ADGRG4Q8IZF6 3080 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 HCFC1P51610 2035 aa13.88□□□□□ -0.19
ZNF541-201ENST00000263351 BDP1A6H8Y1 2624 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 GZMBP10144 247 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 HBG1P69891 147 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 HBG2P69892 147 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 BSXQ3C1V8 233 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 FFAR4Q5NUL3 377 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 UTF1Q5T230 341 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 DPPA3Q6W0C5 159 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 SSX9Q7RTT3 188 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 VKORC1L1Q8N0U8 176 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 FAM173AQ9BQD7 235 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 LINC00470Q9BZP3 86 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 HEATR1Q9H583 2144 aaKnown RBP13.87□□□□□ -0.19
ZNF541-201ENST00000263351 ROS1P08922 2347 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 SMCO3A2RU48 225 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 XKRY2A2RUG3 117 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 C12orf77C9JDV5 145 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 J3QT63 122 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 GATCO43716 136 aaKnown RBP13.87□□□□□ -0.19
ZNF541-201ENST00000263351 MPV17P39210 176 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 GALR1P47211 349 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 SSPNQ14714 243 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 ABHD17BQ5VST6 288 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 ZNF114Q8NC26 417 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 OR10G4Q8NGN3 311 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 OR10G9Q8NGN4 311 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 OR10G7Q8NGN6 311 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
ZNF541-201ENST00000263351 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 KMT2EQ8IZD2 1858 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 KALRNO60229 2985 aa13.87□□□□□ -0.19
ZNF541-201ENST00000263351 LINC00473A8K010 186 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 AGFG2O95081 481 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 TMEM241Q24JQ0 296 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 TMEM14EPQ6UXP3 125 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 MCEMP1Q8IX19 187 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 RAB24Q969Q5 203 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 TRBV24-1A0A075B6N3 115 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 ST8SIA5O15466 376 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 ATP5G3P48201 142 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 PRAMEF6Q5VXH4 476 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 ZNF664Q8N3J9 261 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 MISP3Q96FF7 219 aa13.86□□□□□ -0.19
ZNF541-201ENST00000263351 PSMG3Q9BT73 122 aaPredicted RBP13.86□□□□□ -0.19
ZNF541-201ENST00000263351 TRBV6-6A0A0A6YYG2 114 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 B4DEV8 164 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 SLC25A40Q8TBP6 338 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 SDSLQ96GA7 329 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 OPA3Q9H6K4 179 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 GP6Q9HCN6 339 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms