RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 ZAR1Q86SH2 424 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 CHD2O14647 1828 aaKnown RBP12.84□□□□□ -0.35
CCDC6-201ENST00000263102 VKORC1L1Q8N0U8 176 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 MAP1LC3AQ9H492 121 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 GP6Q9HCN6 339 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 NXT2Q9NPJ8 142 aaKnown RBP12.84□□□□□ -0.35
CCDC6-201ENST00000263102 VAX2Q9UIW0 290 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 CBY1Q9Y3M2 126 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 SLX4Q8IY92 1834 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
CCDC6-201ENST00000263102 TRAV30A0A087WSZ9 112 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 MFAP2P55001 183 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 CSRP2Q16527 193 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 KIR2DL4Q99706 377 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 TSPAN13O95857 204 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 SNRPEP62304 92 aaKnown RBP12.83□□□□□ -0.36
CCDC6-201ENST00000263102 CLEC19AQ6UXS0 136 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 ZNF680Q8NEM1 530 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 A0A1W2PQF6 199 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 OTX1P32242 354 aaPredicted RBP12.83□□□□□ -0.36
CCDC6-201ENST00000263102 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC6-201ENST00000263102 IGSF11Q5DX21 431 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 SLC22A18ASQ8N1D0 253 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 ANGPTL4Q9BY76 406 aa12.83□□□□□ -0.36
CCDC6-201ENST00000263102 C11orf68Q9H3H3 251 aaKnown RBP12.83□□□□□ -0.36
CCDC6-201ENST00000263102 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
CCDC6-201ENST00000263102 DSPPQ9NZW4 1301 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 CDK2AP2O75956 126 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 PGA4P0DJD7 388 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 PGA5P0DJD9 388 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 MVDP53602 400 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 TMEM174Q8WUU8 243 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 WNT10AQ9GZT5 417 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 NPFFR1Q9GZQ6 430 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 ZNF107Q9UII5 783 aaPredicted RBP12.82□□□□□ -0.36
CCDC6-201ENST00000263102 M0R381 172 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 ASCL4Q6XD76 172 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 SRSF12Q8WXF0 261 aaKnown RBP12.82□□□□□ -0.36
CCDC6-201ENST00000263102 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 IL4P05112 153 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 CD33P20138 364 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 OR9G1Q8NH87 305 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 IL19Q9UHD0 177 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 MOSP00540 346 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 SAA1P0DJI8 122 aaPredicted RBP12.82□□□□□ -0.36
CCDC6-201ENST00000263102 C3orf56Q8N813 242 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 CHST5Q9GZS9 411 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 TMEM74BQ9NUR3 256 aa12.82□□□□□ -0.36
CCDC6-201ENST00000263102 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
CCDC6-201ENST00000263102 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 TNFSF10P50591 281 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 BSPH1Q075Z2 132 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 BEND2Q8NDZ0 799 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 KLF14Q8TD94 323 aaPredicted RBP12.81□□□□□ -0.36
CCDC6-201ENST00000263102 SAP25Q8TEE9 199 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 ST6GALNAC2Q9UJ37 374 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
CCDC6-201ENST00000263102 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
CCDC6-201ENST00000263102 MYH7BA7E2Y1 1941 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 EPOPA6NHQ4 379 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 C17orf51A8MQB3 221 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 ZNF688P0C7X2 276 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 SFRP2Q96HF1 295 aa12.81□□□□□ -0.36
CCDC6-201ENST00000263102 NCMAPQ5T1S8 102 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 C10orf128Q5T292 105 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 RBKSQ9H477 322 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 CXorf51AA0A1B0GTR3 108 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 SAP30O75446 220 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 SLC25A45Q8N413 288 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 DNASE2BQ8WZ79 361 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 RAB33BQ9H082 229 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 PPP1R27Q86WC6 154 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 ISOC2Q96AB3 205 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 IGLV3-16A0A075B6K0 115 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 LNP1A1A4G5 178 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 TMEM127O75204 238 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 CA11O75493 328 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 LDLRAD2Q5SZI1 272 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 TMEM170BQ5T4T1 132 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 OR13A1Q8NGR1 328 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 HSPB1P04792 205 aaKnown RBP12.8□□□□□ -0.36
CCDC6-201ENST00000263102 UQCC3Q6UW78 93 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 ZPLD1Q8TCW7 415 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 C2orf88Q9BSF0 95 aa12.8□□□□□ -0.36
CCDC6-201ENST00000263102 FOXS1O43638 330 aa12.79□□□□□ -0.36
CCDC6-201ENST00000263102 SCTP09683 121 aa12.79□□□□□ -0.36
CCDC6-201ENST00000263102 PEBP1P30086 187 aaKnown RBP12.79□□□□□ -0.36
CCDC6-201ENST00000263102 IBA57Q5T440 356 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms