RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 FOXL1Q12952 345 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 SLC24A4Q8NFF2 622 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 FOXB1Q99853 325 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 EML6Q6ZMW3 1958 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 NPPCP23582 126 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 MYPOPQ86VE0 399 aaPredicted RBP12.69□□□□□ -0.38
XRCC1-201ENST00000262887 ZDHHC23Q8IYP9 409 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 CPT1CQ8TCG5 803 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 MRGPRDQ8TDS7 321 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 TMEM238LA0A1B0GVL6 79 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 TRAPPC2LH3BP13 241 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 CIDEAO60543 219 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 SCRG1O75711 98 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 CLDN1O95832 211 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 GLB1P16278 677 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 NTF4P34130 210 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 DSCR4P56555 118 aaPredicted RBP12.69□□□□□ -0.38
XRCC1-201ENST00000262887 TCF23Q7RTU1 214 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 OR56B2PQ8NGI1 322 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 ELOVL5Q9NYP7 299 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 CLEC1BQ9P126 229 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 PPP1R3CQ9UQK1 317 aa12.69□□□□□ -0.38
XRCC1-201ENST00000262887 TDGF1P13385 188 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 MPLP40238 635 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 FFAR4Q5NUL3 377 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 SLC35E1Q96K37 410 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 ZDHHC11Q9H8X9 412 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 PATZ1Q9HBE1 687 aaKnown RBP12.68□□□□□ -0.38
XRCC1-201ENST00000262887 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
XRCC1-201ENST00000262887 MTCH1Q9NZJ7 389 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 LRP5LA4QPB2 252 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 HS3ST1O14792 307 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 ZIC3O60481 467 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 LIFP15018 202 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 PMP22Q01453 160 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 SGMS2Q8NHU3 365 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 VN1R17PQ8TDU5 208 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 PSMF1Q92530 271 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 HSPB9Q9BQS6 159 aa12.68□□□□□ -0.38
XRCC1-201ENST00000262887 C19orf25Q9UFG5 118 aaPredicted RBP12.68□□□□□ -0.38
XRCC1-201ENST00000262887 RBM7Q9Y580 266 aaKnown RBP12.68□□□□□ -0.38
XRCC1-201ENST00000262887 DOCK11Q5JSL3 2073 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 WNT2P09544 360 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 RAC2P15153 192 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 COX5AP20674 150 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 CDKN1AP38936 164 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 YPEL3P61236 119 aaPredicted RBP12.67□□□□□ -0.38
XRCC1-201ENST00000262887 PCBD1P61457 104 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 RDH5Q92781 318 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 SF3B5Q9BWJ5 86 aaKnown RBP12.67□□□□□ -0.38
XRCC1-201ENST00000262887 FGF23Q9GZV9 251 aaPredicted RBP12.67□□□□□ -0.38
XRCC1-201ENST00000262887 OR1A1Q9P1Q5 309 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 ASCC3Q8N3C0 2202 aaKnown RBP12.67□□□□□ -0.38
XRCC1-201ENST00000262887 TMPRSS2O15393 492 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 CCL3P10147 92 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 WDR74Q6RFH5 385 aaPredicted RBP12.67□□□□□ -0.38
XRCC1-201ENST00000262887 AAED1Q7RTV5 226 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 MKXQ8IYA7 352 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 SAXO1Q8IYX7 474 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 NUDT10Q8NFP7 164 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 TSTD1Q8NFU3 115 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 OR1L6Q8NGR2 347 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 KCNS2Q9ULS6 477 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 TP53TG3Q9ULZ0 132 aa12.67□□□□□ -0.38
XRCC1-201ENST00000262887 C1QTNF9P0C862 333 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 EGR1P18146 543 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 ALKBH7Q9BT30 221 aaPredicted RBP12.66□□□□□ -0.38
XRCC1-201ENST00000262887 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 LIN7CQ9NUP9 197 aaKnown RBP12.66□□□□□ -0.38
XRCC1-201ENST00000262887 PPBPP02775 128 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 CELA2AP08217 269 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 CCNOP22674 350 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 NXPH1P58417 271 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 GNB1P62873 340 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 ZNF585BQ52M93 769 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 LYG1Q8N1E2 194 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 CCDC74BQ96LY2 380 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 PDE6DO43924 150 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 IGLV2-14P01704 120 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 CRYAAP02489 173 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 ESDP10768 282 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 MSMO1Q15800 293 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 OR5AU1Q8NGC0 362 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 SGCZQ96LD1 299 aa12.66□□□□□ -0.38
XRCC1-201ENST00000262887 CRIM1Q9NZV1 1036 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms