RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 FOLR2P14207 255 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 TINAGQ9UJW2 476 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 MPC1Q9Y5U8 109 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 GPR6P46095 362 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-202ENST00000262676 PQLC2Q6ZP29 291 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 CABIN1Q9Y6J0 2220 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 C1QTNF9BB2RNN3 333 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 TMEM262E9PQX1 116 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 PRICKLE4Q2TBC4 344 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 KIAA1644Q3SXP7 199 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 A0A0B4J293 547 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 CDX1P47902 265 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-202ENST00000262676 ZNF658BQ4V348 819 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-202ENST00000262676 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 ZNF665Q9H7R5 613 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 PHLDA3Q9Y5J5 127 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 FCGR3AP08637 254 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 ZFP36L2P47974 494 aaKnown RBP11.18□□□□□ -0.62
TTC39A-202ENST00000262676 MGAT2Q10469 447 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 ZG16BQ96DA0 208 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 TMEM160Q9NX00 188 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 SURF2Q15527 256 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-202ENST00000262676 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 OVCH2Q7RTZ1 564 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 BIVMQ86UB2 503 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 AQP10Q96PS8 301 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 GEMIN7Q9H840 131 aaKnown RBP11.17□□□□□ -0.62
TTC39A-202ENST00000262676 SPTA1P02549 2419 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 HLA-DRB1P01911 266 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 ANOS1P23352 680 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 FAM74A4Q5TZK3 123 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 C1QL3Q5VWW1 255 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 SLC25A45Q8N413 288 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 TRBV5-4A0A0C4DH59 114 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 CEACAM18A8MTB9 384 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 KLF9Q13886 244 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-202ENST00000262676 DEGS2Q6QHC5 323 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 SLC22A18ASQ8N1D0 253 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 NKX2-2O95096 273 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 VSIG10L2P0DP72 767 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 HKR1P10072 659 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 CCL3P10147 92 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 SRIP30626 198 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 CTAG1AP78358 180 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 CX3CL1P78423 397 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 RASL10BQ96S79 203 aa11.17□□□□□ -0.62
TTC39A-202ENST00000262676 SNAI2O43623 268 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 EIF3GO75821 320 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 SEC11BP0C7V7 166 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 RNF122Q9H9V4 155 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 RNF7Q9UBF6 113 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 A0A1B0GWB2 263 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 CDC42EP2O14613 210 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 COL10A1Q03692 680 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 MBNL2Q5VZF2 373 aaKnown RBP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 GPR82Q96P67 336 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 GRIFINA4D1Z8 144 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 PRR35P0CG20 571 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 PTP4A1Q93096 173 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 PIMREGQ9BSJ6 248 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 PGPA6NDG6 321 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 CDS2O95674 445 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 DDB2Q92466 427 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 MIXL1Q9H2W2 232 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 MEF2CQ06413 473 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 ZNF56Q15929 161 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 DMKNQ6E0U4 476 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-202ENST00000262676 RARRES2Q99969 163 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 FAM206AQ9NX38 181 aa11.16□□□□□ -0.62
TTC39A-202ENST00000262676 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 MESTQ5EB52 335 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 TYMSP04818 313 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 PGLYRP3Q96LB9 341 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 OR5AC2Q9NZP5 309 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 NRIP2Q9BQI9 281 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 DCTN5Q9BTE1 182 aa11.15□□□□□ -0.62
TTC39A-202ENST00000262676 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 C16orf97H3BN30 126 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 ZNHIT1O43257 154 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 MS4A5Q9H3V2 200 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 KLK13Q9UKR3 277 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 TNFSF18Q9UNG2 199 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 SCN1AP35498 2009 aa11.15□□□□□ -0.63
TTC39A-202ENST00000262676 RPL36A-HNRNPH2H7BZ11 118 aa11.14□□□□□ -0.63
TTC39A-202ENST00000262676 CXCL2P19875 107 aa11.14□□□□□ -0.63
TTC39A-202ENST00000262676 HCP5Q6MZN7 132 aa11.14□□□□□ -0.63
TTC39A-202ENST00000262676 LIMS2Q7Z4I7 341 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms