RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TMEM171Q8WVE6 324 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 ITLN1Q8WWA0 313 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 KPTNQ9Y664 436 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 DEDDO75618 318 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 RPL12P30050 165 aaKnown RBP11.38□□□□□ -0.59
VMP1-201ENST00000262291 SSTR5P35346 364 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
VMP1-201ENST00000262291 ZNF808Q8N4W9 903 aaPredicted RBP11.38□□□□□ -0.59
VMP1-201ENST00000262291 OR10V1Q8NGI7 309 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 ERGIC1Q969X5 290 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
VMP1-201ENST00000262291 TUBD1Q9UJT1 453 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 URGCP-MRPS24S4R325 110 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 PSG2P11465 335 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 DEFB108BQ8NET1 73 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 DNAJB11Q9UBS4 358 aa11.38□□□□□ -0.59
VMP1-201ENST00000262291 RCL1Q9Y2P8 373 aaKnown RBP11.38□□□□□ -0.59
VMP1-201ENST00000262291 TRBV6-6A0A0A6YYG2 114 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 SOX15O60248 233 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 CTXN2P0C2S0 81 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 CD40P25942 277 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 LINC00205P59089 165 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 SRSF7Q16629 238 aaKnown RBP eCLIP11.37□□□□□ -0.59
VMP1-201ENST00000262291 CXorf66Q5JRM2 361 aaPredicted RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 BTNL8Q6UX41 500 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 A0A0G2JRQ6 117 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 UMAD1C9J7I0 102 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 TSTD3H0UI37 97 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 SOD3P08294 240 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 PET100P0DJ07 73 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 OR13C7P0DN81 318 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 LYL1P12980 280 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 FABP4P15090 132 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 CMTM1Q8IZ96 169 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 OR13A1Q8NGR1 328 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 CABLES2Q9BTV7 478 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 FBXL17Q9UF56 701 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 TMEM30CPA0ZSE6 113 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 GLRXP35754 106 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 PPP1CCP36873 323 aaKnown RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 PCP4P48539 62 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 FHITP49789 147 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 ZNF616Q08AN1 781 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 ZNF674Q2M3X9 581 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 KHDC3LQ587J8 217 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
VMP1-201ENST00000262291 SAT2Q96F10 170 aaPredicted RBP11.37□□□□□ -0.59
VMP1-201ENST00000262291 PUS1Q9Y606 427 aaKnown RBP eCLIP11.37□□□□□ -0.59
VMP1-201ENST00000262291 OR2C1O95371 312 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 IL2RGP31785 369 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 PRDX2P32119 198 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 TMEM33P57088 247 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 LRTM2Q8N967 370 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
VMP1-201ENST00000262291 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 TRGV8A0A0C4DH27 118 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 C16orf97H3BN30 126 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 SSSCA1O60232 199 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 HBZP02008 142 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 OMGP23515 440 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
VMP1-201ENST00000262291 NHLH2Q02577 135 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 MIDNQ504T8 468 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 BTNL3Q6UXE8 466 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 KCNIP1Q9NZI2 227 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 FBXO7Q9Y3I1 522 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 WIPI2Q9Y4P8 454 aa11.36□□□□□ -0.59
VMP1-201ENST00000262291 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 DPRXA6NFQ7 191 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 PHOX2AO14813 284 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 TSPAN15O95858 294 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 CYB5R3P00387 301 aaPredicted RBP11.35□□□□□ -0.59
VMP1-201ENST00000262291 CEBPGP53567 150 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 PKIAP61925 76 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 HMGN3Q15651 99 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 FAM169BQ8N8A8 192 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 MBNL3Q9NUK0 354 aaKnown RBP11.35□□□□□ -0.59
VMP1-201ENST00000262291 FAM24AA6NFZ4 105 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 THBDP07204 575 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 F2RP25116 425 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 FAM185AQ8N0U4 392 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 C2orf88Q9BSF0 95 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
VMP1-201ENST00000262291 RFNGQ9Y644 331 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms