RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 GABRA6Q16445 453 aa16.15■□□□□ 0.18
SMAD7-201ENST00000262158 LRP11Q86VZ4 500 aa16.15■□□□□ 0.18
SMAD7-201ENST00000262158 TCTEX1D2Q8WW35 142 aa16.15■□□□□ 0.18
SMAD7-201ENST00000262158 LEAP2Q969E1 77 aa16.15■□□□□ 0.18
SMAD7-201ENST00000262158 YPEL4Q96NS1 127 aa16.15■□□□□ 0.18
SMAD7-201ENST00000262158 OPN3Q9H1Y3 402 aaPredicted RBP16.15■□□□□ 0.18
SMAD7-201ENST00000262158 LINC00473A8K010 186 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 UBE2CO00762 179 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 TFF3Q07654 80 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 SP5Q6BEB4 398 aaPredicted RBP16.14■□□□□ 0.17
SMAD7-201ENST00000262158 VHLLQ6RSH7 139 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 NIPSNAP3BQ9BS92 247 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 FIP1L1Q6UN15 594 aaKnown RBP16.14■□□□□ 0.17
SMAD7-201ENST00000262158 OR5T1Q8NG75 326 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 PFDN5Q99471 154 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 PSG11Q9UQ72 335 aa16.14■□□□□ 0.17
SMAD7-201ENST00000262158 TRBV6-6A0A0A6YYG2 114 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 TIMM8AO60220 97 aaPredicted RBP16.13■□□□□ 0.17
SMAD7-201ENST00000262158 TRGC2P03986 189 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 CD200P41217 278 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 MSMPQ1L6U9 139 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 Q3ZCU0 254 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 ZNF506Q5JVG8 444 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 FAM90A2PQ658T7 463 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 DEFB124Q8NES8 71 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 RAB40CQ96S21 281 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 AURKAIP1Q9NWT8 199 aaPredicted RBP16.13■□□□□ 0.17
SMAD7-201ENST00000262158 DUSP13Q9UII6 198 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 PKDREJQ9NTG1 2253 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 LOC102723971A0A1B0GUV8 181 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 ODAMA1E959 279 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 IFITM10A6NMD0 228 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 SMIM6P0DI80 62 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 SLC38A11Q08AI6 406 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 ACSM6Q6P461 480 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 RPRMLQ8N4K4 120 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 ZDHHC11Q9H8X9 412 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 IGHV2-5P01817 119 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 COL10A1Q03692 680 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 RNF212Q495C1 297 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 WDR25Q64LD2 544 aaPredicted RBP16.13■□□□□ 0.17
SMAD7-201ENST00000262158 RPP25LQ8N5L8 163 aaKnown RBP16.13■□□□□ 0.17
SMAD7-201ENST00000262158 IL22RA2Q969J5 263 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 POLDIP2Q9Y2S7 368 aa16.13■□□□□ 0.17
SMAD7-201ENST00000262158 DUXBA0A1W2PPF3 345 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 SELLP14151 372 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 EGR1P18146 543 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 KIR2DL2P43627 348 aaPredicted RBP16.12■□□□□ 0.17
SMAD7-201ENST00000262158 TRIP6Q15654 476 aaKnown RBP16.12■□□□□ 0.17
SMAD7-201ENST00000262158 GCSAMLQ5JQS6 135 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 GALMQ96C23 342 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 RHOVQ96L33 236 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 ANKRD11Q6UB99 2663 aaPredicted RBP16.12■□□□□ 0.17
SMAD7-201ENST00000262158 CECR9P0C854 216 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 ZNF146Q15072 292 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 FAM214BQ7L5A3 538 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 LINC00596Q86U02 117 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 TVP23CQ96ET8 276 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 GMPPAQ96IJ6 420 aaPredicted RBP16.12■□□□□ 0.17
SMAD7-201ENST00000262158 OPA3Q9H6K4 179 aa16.12■□□□□ 0.17
SMAD7-201ENST00000262158 MBNL3Q9NUK0 354 aaKnown RBP16.12■□□□□ 0.17
SMAD7-201ENST00000262158 LIN7CQ9NUP9 197 aaKnown RBP16.12■□□□□ 0.17
SMAD7-201ENST00000262158 HOXB1P14653 301 aaPredicted RBP16.11■□□□□ 0.17
SMAD7-201ENST00000262158 RTP5Q14D33 572 aa16.11■□□□□ 0.17
SMAD7-201ENST00000262158 RPUSD4Q96CM3 377 aaKnown RBP16.11■□□□□ 0.17
SMAD7-201ENST00000262158 DFFBO76075 338 aa16.11■□□□□ 0.17
SMAD7-201ENST00000262158 S100A8P05109 93 aa16.11■□□□□ 0.17
SMAD7-201ENST00000262158 MDH2P40926 338 aaKnown RBP16.11■□□□□ 0.17
SMAD7-201ENST00000262158 ZNF610Q8N9Z0 462 aa16.11■□□□□ 0.17
SMAD7-201ENST00000262158 WDR31Q8NA23 367 aa16.11■□□□□ 0.17
SMAD7-201ENST00000262158 WDR61Q9GZS3 305 aaKnown RBP16.11■□□□□ 0.17
SMAD7-201ENST00000262158 TUBA4BQ9H853 241 aa16.11■□□□□ 0.17
SMAD7-201ENST00000262158 MAP1LC3B2A6NCE7 125 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 PAX6P26367 422 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 TNFRSF9Q07011 255 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 WDR82Q6UXN9 313 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 ZNF600Q6ZNG1 722 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 MAP1LC3BQ9GZQ8 125 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 AP4M1O00189 453 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 CEACAM1P13688 526 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 MRPL49Q13405 166 aaKnown RBP16.1■□□□□ 0.17
SMAD7-201ENST00000262158 TMEM178AQ8NBL3 297 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 KCNIP1Q9NZI2 227 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 PTPRZ1P23471 2315 aaPredicted RBP16.1■□□□□ 0.17
SMAD7-201ENST00000262158 BCL2P10415 239 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 TGFBR3Q03167 851 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 LRRC75BQ2VPJ9 315 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 TAF15Q92804 592 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMAD7-201ENST00000262158 DOK5Q9P104 306 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 CLCF1Q9UBD9 225 aa16.1■□□□□ 0.17
SMAD7-201ENST00000262158 HCFC1P51610 2035 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 HSPB1P04792 205 aaKnown RBP16.09■□□□□ 0.17
SMAD7-201ENST00000262158 RAC2P15153 192 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 CD177Q8N6Q3 437 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 OR2Z1Q8NG97 314 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 IQCF6A8MYZ5 107 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 DUX4L9Q6RFH8 374 aaPredicted RBP16.09■□□□□ 0.17
SMAD7-201ENST00000262158 ZNRF1Q8ND25 227 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 CA5BP1Q8WTZ4 195 aa16.09■□□□□ 0.17
SMAD7-201ENST00000262158 LHX4Q969G2 390 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms