RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MEF2CQ06413 473 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-201ENST00000258962 EIF4EBP1Q13541 118 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-201ENST00000258962 ZNF273Q14593 569 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 MORN2Q502X0 79 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 UTF1Q5T230 341 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 C11orf87Q6NUJ2 197 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 LYZL2Q7Z4W2 148 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 ZNF546Q86UE3 836 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM56Q96MV1 263 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 GNG12Q9UBI6 72 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 UBE2J1Q9Y385 318 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-201ENST00000258962 LINC00312Q9Y6C7 94 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM56-RWDD3S4R434 201 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 YLPM1P49750 1951 aaKnown RBP14.35□□□□□ -0.11
SRSF1-201ENST00000258962 TLN2Q9Y4G6 2542 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 ABCA1O95477 2261 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 A0A096LNT2 108 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 hADV38S2A0JD32 116 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 ST8SIA5O15466 376 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 YPEL1O60688 119 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 S100A11P31949 105 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 IL15RAQ13261 267 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 OPCMLQ14982 345 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 LRRC10Q5BKY1 277 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 AVPI1Q5T686 147 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM268Q5VZI3 342 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 OR8H1Q8NGG4 311 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 OR51H1Q8NH63 302 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 YPEL2Q96QA6 119 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 AGMATQ9BSE5 352 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 MFFQ9GZY8 342 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 ZFP57Q9NU63 452 aa14.35□□□□□ -0.11
SRSF1-201ENST00000258962 ZNF469Q96JG9 3925 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-201ENST00000258962 ARPC5O15511 151 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 OR2F2O95006 317 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 NUP62P37198 522 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-201ENST00000258962 RPL31P62899 125 aaKnown RBP14.34□□□□□ -0.11
SRSF1-201ENST00000258962 OR2F1Q13607 317 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 MSMO1Q15800 293 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM249Q2WGJ8 235 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 LRRC37A5PQ49AS3 106 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 ESCO2Q56NI9 601 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 SELENOHQ8IZQ5 122 aaKnown RBP14.34□□□□□ -0.11
SRSF1-201ENST00000258962 SLC35G3Q8N808 338 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 TIMD4Q96H15 378 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 ABHD14BQ96IU4 210 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 RAB9BQ9NP90 201 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 GFOD1Q9NXC2 390 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 TAS2R3Q9NYW6 316 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 IDI2-AS1Q9NZ38 188 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 PSG11Q9UQ72 335 aa14.34□□□□□ -0.11
SRSF1-201ENST00000258962 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 MMP23AO75900 390 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 CDS2O95674 445 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 CXCL2P19875 107 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 PRAMEF5Q5TYX0 476 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 INO80EQ8NBZ0 244 aaPredicted RBP14.33□□□□□ -0.12
SRSF1-201ENST00000258962 ZBTB34Q8NCN2 500 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 EDARADDQ8WWZ3 215 aa14.33□□□□□ -0.12
SRSF1-201ENST00000258962 H1FXQ92522 213 aaKnown RBP14.33□□□□□ -0.12
SRSF1-201ENST00000258962 CR1P17927 2039 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 SLC31A2O15432 143 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 ATP6V1G1O75348 118 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 MPC2O95563 127 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 IGHV3-7P01780 117 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 CCL3L1P16619 93 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF134P52741 427 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF345Q14585 488 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 IAH1Q2TAA2 248 aaPredicted RBP14.32□□□□□ -0.12
SRSF1-201ENST00000258962 CYB5R2Q6BCY4 276 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 TEX261Q6UWH6 196 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF841Q6ZN19 808 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 TMUB2Q71RG4 321 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 FAM216AQ8WUB2 273 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 RAB1CQ92928 201 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 LEAP2Q969E1 77 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 IFI27L2Q9H2X8 130 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 SDHAF2Q9NX18 166 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 U3KQ87 197 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 HIVEP2P31629 2446 aa14.32□□□□□ -0.12
SRSF1-201ENST00000258962 DUXBA0A1W2PPF3 345 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 RLN2P04090 185 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 RPL30P62888 115 aaKnown RBP14.31□□□□□ -0.12
SRSF1-201ENST00000258962 TMEM30BQ3MIR4 351 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ACOT7LQ6ZUV0 252 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF695Q8IW36 515 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 FAM219AQ8IW50 185 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF439Q8NDP4 499 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 IL22RA2Q969J5 263 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 LIN7CQ9NUP9 197 aaKnown RBP14.31□□□□□ -0.12
SRSF1-201ENST00000258962 LPAR3Q9UBY5 353 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 TMED3Q9Y3Q3 217 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 H0YIZ8 118 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ITGB1BP1O14713 200 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 CD5LO43866 347 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 NFYBP25208 207 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ERVFRD-1P60508 538 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 SMCO1Q147U7 214 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms