RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 KBTBD11-OT1A0A1B0GTJ5 212 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 PPIAL4DF5H284 164 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 JTBO76095 146 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 PPIAL4FP0DN26 164 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 LPAR6P43657 344 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 RPL30P62888 115 aaKnown RBP22.91■■□□□ 1.26
CCM2-201ENST00000258781 CORO2AQ92828 525 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 CLN8Q9UBY8 286 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 PPIAL4AQ9Y536 164 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 ARFGEF3Q5TH69 2177 aa22.91■■□□□ 1.26
CCM2-201ENST00000258781 EPHA1P21709 976 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 TMEM30BQ3MIR4 351 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 OR2C3Q8N628 320 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 SSSCA1O60232 199 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 CLDN1O95832 211 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 VAMP2P63027 116 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 TCTEX1D2Q8WW35 142 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 LINC00574Q9H8X3 128 aa22.9■■□□□ 1.26
CCM2-201ENST00000258781 ZNF729A6NN14 1252 aaPredicted RBP22.89■■□□□ 1.25
CCM2-201ENST00000258781 GPR12P47775 334 aa22.89■■□□□ 1.25
CCM2-201ENST00000258781 AANATQ16613 207 aa22.89■■□□□ 1.25
CCM2-201ENST00000258781 Q3ZCU0 254 aa22.89■■□□□ 1.25
CCM2-201ENST00000258781 EIF5AL1Q6IS14 154 aaKnown RBP22.89■■□□□ 1.25
CCM2-201ENST00000258781 REG4Q9BYZ8 158 aa22.89■■□□□ 1.25
CCM2-201ENST00000258781 MAGT1Q9H0U3 335 aa22.89■■□□□ 1.25
CCM2-201ENST00000258781 LYRM2Q9NU23 88 aaPredicted RBP22.89■■□□□ 1.25
CCM2-201ENST00000258781 WRBO00258 174 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 ATG12O94817 140 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 IGFBP2P18065 325 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 SWI5Q1ZZU3 235 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 ZNF672Q499Z4 452 aaPredicted RBP22.88■■□□□ 1.25
CCM2-201ENST00000258781 TCF23Q7RTU1 214 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 CCL17Q92583 94 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 MARVELD3Q96A59 401 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 TMEM204Q9BSN7 226 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 GFOD1Q9NXC2 390 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 CACNG5Q9UF02 275 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 MMP24Q9Y5R2 645 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 USF3Q68DE3 2245 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 DCHS2Q6V1P9 2916 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 MFSD2BA6NFX1 497 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 TMPRSS2O15393 492 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 FGF16O43320 207 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 BTNL3Q6UXE8 466 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 Q6ZRM9 215 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 UBAC2Q8NBM4 344 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 TMED6Q8WW62 240 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 SLC25A31Q9H0C2 315 aa22.88■■□□□ 1.25
CCM2-201ENST00000258781 KIAA1324LA8MWY0 1029 aaPredicted RBP22.87■■□□□ 1.25
CCM2-201ENST00000258781 EWSR1Q01844 656 aaKnown RBP eCLIP22.87■■□□□ 1.25
CCM2-201ENST00000258781 SPAG16Q8N0X2 631 aa22.87■■□□□ 1.25
CCM2-201ENST00000258781 FGFRL1Q8N441 504 aa22.87■■□□□ 1.25
CCM2-201ENST00000258781 SMIM3Q9BZL3 60 aa22.87■■□□□ 1.25
CCM2-201ENST00000258781 COA4Q9NYJ1 87 aa22.87■■□□□ 1.25
CCM2-201ENST00000258781 RAMP3O60896 148 aa22.86■■□□□ 1.25
CCM2-201ENST00000258781 RAB7AP51149 207 aa22.86■■□□□ 1.25
CCM2-201ENST00000258781 RNF141Q8WVD5 230 aa22.86■■□□□ 1.25
CCM2-201ENST00000258781 BSCL2Q96G97 398 aaPredicted RBP22.86■■□□□ 1.25
CCM2-201ENST00000258781 BARX1Q9HBU1 254 aaPredicted RBP22.86■■□□□ 1.25
CCM2-201ENST00000258781 SLC25A10Q9UBX3 287 aaPredicted RBP22.86■■□□□ 1.25
CCM2-201ENST00000258781 GAB2Q9UQC2 676 aa22.86■■□□□ 1.25
CCM2-201ENST00000258781 BORCS7-ASMTA0A0B4J1R7 106 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 hADV38S2A0JD32 116 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 C17orf98A8MV24 154 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 TNFRSF13BO14836 293 aaPredicted RBP22.85■■□□□ 1.25
CCM2-201ENST00000258781 OMGP23515 440 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 MEF2CQ06413 473 aaPredicted RBP22.85■■□□□ 1.25
CCM2-201ENST00000258781 SRSF1Q07955 248 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCM2-201ENST00000258781 MUC15Q8N387 334 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 ARV1Q9H2C2 271 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 IFI27L2Q9H2X8 130 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 LAMP3Q9UQV4 416 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 LINC00312Q9Y6C7 94 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 UTP20O75691 2785 aaKnown RBP22.85■■□□□ 1.25
CCM2-201ENST00000258781 LRRK2Q5S007 2527 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 FAM24AA6NFZ4 105 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 CHST1O43916 411 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 CAV2P51636 162 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 BRWD1-AS2P59051 145 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 CD300LFQ8TDQ1 290 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 RAB40CQ96S21 281 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 TAS2R3Q9NYW6 316 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 IDI2-AS1Q9NZ38 188 aa22.85■■□□□ 1.25
CCM2-201ENST00000258781 IGHV1-69-2A0A0G2JMI3 117 aa22.84■■□□□ 1.25
CCM2-201ENST00000258781 IGSF23A1L1A6 192 aa22.84■■□□□ 1.25
CCM2-201ENST00000258781 P0C879 139 aa22.84■■□□□ 1.25
CCM2-201ENST00000258781 NHLH2Q02577 135 aa22.84■■□□□ 1.25
CCM2-201ENST00000258781 IZUMO4Q1ZYL8 232 aa22.84■■□□□ 1.25
CCM2-201ENST00000258781 TOR2AQ5JU69 321 aa22.84■■□□□ 1.25
CCM2-201ENST00000258781 HSD17B13Q7Z5P4 300 aaPredicted RBP22.84■■□□□ 1.25
CCM2-201ENST00000258781 LINC00473A8K010 186 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 NDUFB7P17568 137 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 DUTP33316 252 aaKnown RBP22.83■■□□□ 1.25
CCM2-201ENST00000258781 OR2B11Q5JQS5 317 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 CLEC9AQ6UXN8 241 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 TMEM252Q8N6L7 170 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 ABHD14AQ9BUJ0 271 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 WFDC1Q9HC57 220 aa22.83■■□□□ 1.25
CCM2-201ENST00000258781 FAM90A26D6RGX4 464 aa22.83■■□□□ 1.24
CCM2-201ENST00000258781 I3L521 148 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms