RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IL21Q9HBE4 155 aa6.58□□□□□ -1.36
GPNMB-201ENST00000258733 TECRQ9NZ01 308 aaKnown RBP6.58□□□□□ -1.36
GPNMB-201ENST00000258733 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
GPNMB-201ENST00000258733 F8W1H4 67 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 TBL1XO60907 577 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 HIST1H1DP16402 221 aaKnown RBP6.57□□□□□ -1.36
GPNMB-201ENST00000258733 PSMB4P28070 264 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 RPL12P30050 165 aaKnown RBP6.57□□□□□ -1.36
GPNMB-201ENST00000258733 EDDM3AQ14507 147 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 SPATA12Q7Z6I5 190 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 OR5D14Q8NGL3 314 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 OR5H2Q8NGV7 314 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 PPTC7Q8NI37 304 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.57□□□□□ -1.36
GPNMB-201ENST00000258733 SLC35A4Q96G79 324 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 WDYHV1Q96HA8 205 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 EHFQ9NZC4 300 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 ANK1P16157 1881 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 A0A1B0GX51 115 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 K7N7A8 449 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 RHODO00212 210 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 IRF1P10914 325 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 HIST1H1CP16403 213 aaKnown RBP6.57□□□□□ -1.36
GPNMB-201ENST00000258733 REG1BP48304 166 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 CRYBA2P53672 197 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 EIF3IQ13347 325 aaKnown RBP6.57□□□□□ -1.36
GPNMB-201ENST00000258733 OR10J3Q5JRS4 329 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 VAX1Q5SQQ9 334 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 SLC25A34Q6PIV7 304 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 SLC25A42Q86VD7 318 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 BAGE3Q86Y29 109 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 BAGE2Q86Y30 109 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 OR8S1Q8NH09 359 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 ZNRF2Q8NHG8 242 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 MBD3L1Q8WWY6 194 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 LINC00597Q9H2U6 94 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 CMC2Q9NRP2 79 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 TP73-AS1Q9UF72 201 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 DENND4CQ5VZ89 1909 aa6.57□□□□□ -1.36
GPNMB-201ENST00000258733 J3KTA2 159 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 CD1AP06126 327 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 CRISP2P16562 243 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 SRD5A1P18405 259 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 ORM2P19652 201 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 FCGR2CP31995 323 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 TNFSF9P41273 254 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 DLX6P56179 175 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 CLDN6P56747 220 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 DLX2Q07687 328 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-201ENST00000258733 MS4A18Q3C1V0 323 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 C3orf36Q3SXR2 165 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 ETDBQ3ZM63 59 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 DHRS13Q6UX07 377 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 MDS2Q8NDY4 140 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 OR4K13Q8NH42 304 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 FGF11Q92914 225 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 MS4A6AQ9H2W1 248 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 EDA2RQ9HAV5 297 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 PRTFDC1Q9NRG1 225 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 IDI2-AS1Q9NZ38 188 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF257Q9Y2Q1 563 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 HLA-DRB1P01911 266 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 LGALS2P05162 132 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 MALP21145 153 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 NBL1P41271 181 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 RPS24P62847 133 aaKnown RBP6.56□□□□□ -1.36
GPNMB-201ENST00000258733 TLE1Q04724 770 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 HFE2Q6ZVN8 426 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF114Q8NC26 417 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 OR2M3Q8NG83 312 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 MAFAQ8NHW3 353 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-201ENST00000258733 PATJQ8NI35 1801 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 MAL2Q969L2 176 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 OR2H1Q9GZK4 316 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 COMMD5Q9GZQ3 224 aa6.56□□□□□ -1.36
GPNMB-201ENST00000258733 TMEM250H0YL14 139 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 TGFBR3LH3BV60 316 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CLDN7O95471 211 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 SLC2A10O95528 541 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 LSM8O95777 96 aaKnown RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 REG1AP05451 166 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 KLK1P06870 262 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 ATP1B2P14415 290 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 PRDX3P30048 256 aaKnown RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 LHX2P50458 406 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 INSL3P51460 131 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 SNRPFP62306 86 aaKnown RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CXCL9Q07325 125 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 WFDC2Q14508 124 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CHRDL2Q6WN34 429 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 DOK3Q7L591 496 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 FAM214BQ7L5A3 538 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 SH2D6Q7Z4S9 175 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 KRTCAP2Q8N6L1 136 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 B3GALNT2Q8NCR0 500 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 RASL11BQ9BPW5 248 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms