RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SHARPINQ9H0F6 387 aa7.61□□□□□ -1.19
CKAP2-201ENST00000258607 CXXC4Q9H2H0 198 aa7.61□□□□□ -1.19
CKAP2-201ENST00000258607 PLEKHF2Q9H8W4 249 aa7.61□□□□□ -1.19
CKAP2-201ENST00000258607 FAM157AC9JC47 383 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 PGA5P0DJD9 388 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 GATA2P23769 480 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-201ENST00000258607 LGALS4P56470 323 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 ARL16Q0P5N6 197 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 Q6P435 159 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 DHRS11Q6UWP2 260 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 FAM90A1Q86YD7 464 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 C14orf79Q96F83 325 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 NKX6-2Q9C056 277 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-201ENST00000258607 SAP30LQ9HAJ7 183 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 LPAR3Q9UBY5 353 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 SELENOKQ9Y6D0 94 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 IGKV1D-17A0A075B6S4 117 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 IFNA5P01569 189 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 ADCYAP1P18509 176 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 MECP2P51608 486 aaKnown RBP7.6□□□□□ -1.19
CKAP2-201ENST00000258607 RPUSD4Q96CM3 377 aaKnown RBP7.6□□□□□ -1.19
CKAP2-201ENST00000258607 WFIKKN1Q96NZ8 548 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 ZNF665Q9H7R5 613 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 FBLN5Q9UBX5 448 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 USP24Q9UPU5 2620 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 AHRRA9YTQ3 701 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 RNASEK-C17orf49H0YIS7 233 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 IGKV1-39P01597 117 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 IGKV1D-39P04432 117 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 NAT1P18440 290 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 VDAC1P21796 283 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 CD40P25942 277 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 IL24Q13007 206 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 DIAPH2-AS1Q14236 149 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 MOB3BQ86TA1 216 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 DOK5Q9P104 306 aa7.6□□□□□ -1.19
CKAP2-201ENST00000258607 MRPS18CQ9Y3D5 142 aaKnown RBP7.6□□□□□ -1.19
CKAP2-201ENST00000258607 A0A1W2PPE2 198 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 NDUFS7O75251 213 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 IGKV1-5P01602 117 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 CD37P11049 281 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 MMP9P14780 707 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 FAM122CQ6P4D5 195 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 LYPD2Q6UXB3 125 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 CA5BP1Q8WTZ4 195 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 SIRT7Q9NRC8 400 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 SLC25A15Q9Y619 301 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 FN1P02751 2386 aaKnown RBP7.59□□□□□ -1.19
CKAP2-201ENST00000258607 hCG_1809904A0A1W2PP81 198 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 A0A1W2PR64 198 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 A0A1W2PRV1 198 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 ODAMA1E959 279 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 DPRXA6NFQ7 191 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 CRYABP02511 175 aaKnown RBP7.59□□□□□ -1.19
CKAP2-201ENST00000258607 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 RPL23AP62750 156 aaKnown RBP7.59□□□□□ -1.19
CKAP2-201ENST00000258607 MLANAQ16655 118 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 SMUG1Q53HV7 270 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 C10orf55Q5SWW7 151 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 CST9LP1Q5W188 147 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 FAHD2BQ6P2I3 314 aaPredicted RBP7.59□□□□□ -1.19
CKAP2-201ENST00000258607 TMEM108Q6UXF1 575 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 C11orf53Q8IXP5 236 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 GATAD1Q8WUU5 269 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 FAHD2AQ96GK7 314 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 FAM212BQ9NTI7 297 aaPredicted RBP7.59□□□□□ -1.19
CKAP2-201ENST00000258607 UQCC1Q9NVA1 299 aa7.59□□□□□ -1.19
CKAP2-201ENST00000258607 IGHV3OR16-10A0A075B7F0 116 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 SYNGR2O43760 224 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 SLC25A4P12235 298 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 CCKARP32238 428 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 ZNF134P52741 427 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 TBR1Q16650 682 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 ZNF324BQ6AW86 544 aaPredicted RBP7.59□□□□□ -1.2
CKAP2-201ENST00000258607 EIF5AL1Q6IS14 154 aaKnown RBP7.59□□□□□ -1.2
CKAP2-201ENST00000258607 MEGF10Q96KG7 1140 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 C19orf12Q9NSK7 152 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 NF1P21359 2839 aa7.59□□□□□ -1.2
CKAP2-201ENST00000258607 HELZ2Q9BYK8 2649 aaKnown RBP7.59□□□□□ -1.2
CKAP2-201ENST00000258607 TMEM218A2RU14 115 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 A8MXE2 369 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 UMAD1C9J7I0 102 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 H3BTX0 84 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 TMEM127O75204 238 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 JTBO76095 146 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 IGKV3-15P01624 115 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 HOXA1P49639 335 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-201ENST00000258607 GUK1Q16774 197 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 Q6ZS92 163 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 FAM24BQ8N5W8 94 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 SPIN2AQ99865 258 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 SPIN2BQ9BPZ2 258 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 LAMP3Q9UQV4 416 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 TMED3Q9Y3Q3 217 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 IGHV3OR16-8A0A075B7F1 116 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 TRAV38-1A0A0B4J264 116 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 IGHG3P01860 377 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 F2RL1P55085 397 aa7.58□□□□□ -1.2
CKAP2-201ENST00000258607 TFF3Q07654 80 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms