RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 IGHV3OR16-13A0A075B7E8 117 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 IGHV3-74A0A0B4J1X5 117 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 SULT1A2P50226 295 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 PCOLCEQ15113 449 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF738Q8NE65 137 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 OR52M1Q8NGK5 317 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 RAMP1O60894 148 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 PITX3O75364 302 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 NFAM1Q8NET5 270 aaPredicted RBP16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 OR4B1Q8NGF8 309 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 PTX4Q96A99 478 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 DIRC2Q96SL1 478 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 CFHR5Q9BXR6 569 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF735P0CB33 412 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 KLK2P20151 261 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 FCGR2BP31994 310 aaPredicted RBP16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 TM4SF20Q53R12 229 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF645Q8N7E2 425 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 RHOVQ96L33 236 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 LNP1A1A4G5 178 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 ID4P47928 161 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 MFAP2P55001 183 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 OR5AU1Q8NGC0 362 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 SIGLEC12Q96PQ1 595 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 NPVFQ9HCQ7 196 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 S4R3C0 116 aa16.07■□□□□ 0.16
SMARCC1-201ENST00000254480 ID1P41134 155 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 PEAR1Q5VY43 1037 aaPredicted RBP16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 STXBP6Q8NFX7 210 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 TMEM191AQ9H0A3 160 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 ADAM11O75078 769 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 FAM106CPP0CH98 169 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 BTF3P20290 206 aaKnown RBP16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 IGKV1D-42A0A075B6H8 117 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 CORTO00230 105 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 PGLYRP1O75594 196 aaPredicted RBP16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 IGKV3-20P01619 116 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 ATP5J2P56134 94 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 RPL24P83731 157 aaKnown RBP16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 RND2P52198 227 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 WNT9BO14905 357 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 IGHV3-23P01764 117 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 PPP1R3EQ9H7J1 279 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 CALYQ9NYX4 217 aa16.06■□□□□ 0.16
SMARCC1-201ENST00000254480 PPIAL4CA0A0B4J2A2 164 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 PGA5P0DJD9 388 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 PPIAL4GP0DN37 164 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 FAM3BP58499 235 aaPredicted RBP16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 SMUG1Q53HV7 270 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 TMEM252Q8N6L7 170 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 SGMS2Q8NHU3 365 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 IFT22Q9H7X7 185 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 UBE2V2Q15819 145 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 FAM201AQ5SY85 155 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 FGFRL1Q8N441 504 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 SFTPCP11686 197 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 PRB3Q04118 309 aaPredicted RBP16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 MYOZ3Q8TDC0 251 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 FAM206AQ9NX38 181 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 RPL8P62917 257 aaKnown RBP16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 GPR146Q96CH1 333 aa16.05■□□□□ 0.16
SMARCC1-201ENST00000254480 RTTNQ86VV8 2226 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 ODAMA1E959 279 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 MUC1P15941 1255 aaPredicted RBP16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 NMUP48645 174 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNRF1Q8ND25 227 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF502Q8TBZ5 544 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF107Q9UII5 783 aaPredicted RBP16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 SUCLG1P53597 346 aaKnown RBP16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 FXYD3Q14802 87 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 WNT5BQ9H1J7 359 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 BET1LQ9NYM9 111 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 PIN1P1O15428 100 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 ZG16O60844 167 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 DEDDO75618 318 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 CLDN18P56856 261 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 H7C2G1 150 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 MEOX2P50222 304 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 P2RY4P51582 365 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 DLX1P56177 255 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 SLC25A38Q96DW6 304 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 TRBV5-5A0A0J9YX44 114 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 PGPA6NDG6 321 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 GCSHP23434 173 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 ABHD12Q8N2K0 398 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 SPSB2Q99619 263 aa16.04■□□□□ 0.16
SMARCC1-201ENST00000254480 KLF4O43474 513 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF383Q8NA42 475 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 MARS2Q96GW9 593 aaKnown RBP16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 LYRM2Q9NU23 88 aaPredicted RBP16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 S1PR2O95136 353 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF658BQ4V348 819 aaPredicted RBP16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 TMEM222Q9H0R3 208 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 IDI2-AS1Q9NZ38 188 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 LY75O60449 1722 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 H0Y980 276 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 M0R3E3 92 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 ISLRO14498 428 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 DNASE2BQ8WZ79 361 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms