RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR2T10Q8NGZ9 312 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 RAB24Q969Q5 203 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 TMEM9BQ9NQ34 198 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 KCNIP1Q9NZI2 227 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 C11orf94C9JXX5 98 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 IGKV1-39P01597 117 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 IGKV1D-39P04432 117 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 CTXN2P0C2S0 81 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 UCP2P55851 309 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 RPL23P62829 140 aaKnown RBP10.15□□□□□ -0.79
USHBP1-201ENST00000252597 CEACAM21Q3KPI0 293 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 HAPLN4Q86UW8 402 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 APOBEC3DQ96AK3 386 aaPredicted RBP10.15□□□□□ -0.79
USHBP1-201ENST00000252597 IMMP1LQ96LU5 166 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 GCM1Q9NP62 436 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.79
USHBP1-201ENST00000252597 K7ESF4 209 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 EREGO14944 169 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 ACTL6BO94805 426 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 GZMBP10144 247 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 FABP6P51161 128 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 GNG3P63215 75 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 TRIM61Q5EBN2 209 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 DRAM1Q8N682 238 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 DCTN5Q9BTE1 182 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 OR2J1Q9GZK6 312 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 PAM16Q9Y3D7 125 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 RNF115Q9Y4L5 304 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 SLC31A2O15432 143 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 HIST1H3AP68431 136 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 FOXO1Q12778 655 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 PNRC1Q12796 327 aaPredicted RBP10.14□□□□□ -0.79
USHBP1-201ENST00000252597 OR8B8Q15620 311 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 Q3ZCU0 254 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 H2BFWTQ7Z2G1 175 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 TMEM256Q8N2U0 113 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 CNEP1R1Q8N9A8 125 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 DDA1Q9BW61 102 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 WDR61Q9GZS3 305 aaKnown RBP10.14□□□□□ -0.79
USHBP1-201ENST00000252597 CISD1Q9NZ45 108 aaKnown RBP10.14□□□□□ -0.79
USHBP1-201ENST00000252597 PSG11Q9UQ72 335 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 DMXL1Q9Y485 3027 aa10.14□□□□□ -0.79
USHBP1-201ENST00000252597 A0A087WWC5 75 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 ST8SIA5O15466 376 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 LYZL6O75951 148 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 S1PR2O95136 353 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 OR2H2O95918 312 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 MT-CO3P00414 261 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 CELA3BP08861 270 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 C1QTNF9P0C862 333 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 SELLP14151 372 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 ATP5G3P48201 142 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 CD81P60033 236 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 PAX5Q02548 391 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 PCSK4Q6UW60 755 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF573Q86YE8 665 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 OR5P3Q8WZ94 311 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TMEM18Q96B42 140 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 SAMD10Q9BYL1 202 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 SMDT1Q9H4I9 107 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 HEYLQ9NQ87 328 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TUBG2Q9NRH3 451 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TIMM8BQ9Y5J9 83 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 CEP192Q8TEP8 1941 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TRAV34A0A0B4J273 112 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 A6NNC1 897 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 ETV2O00321 342 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 NAPSAO96009 420 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF25P17030 456 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 PDLIM3Q53GG5 364 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 NUFIP2Q7Z417 695 aaKnown RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 CARFQ8N187 725 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 SF3B5Q9BWJ5 86 aaKnown RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TCL1AP56279 114 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 ASPHD1Q5U4P2 390 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TMEM42Q69YG0 159 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 TMEM183AQ8IXX5 376 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
USHBP1-201ENST00000252597 LIN7CQ9NUP9 197 aaKnown RBP10.13□□□□□ -0.79
USHBP1-201ENST00000252597 KDF1Q8NAX2 398 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 SGMS2Q8NHU3 365 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 GTF3AQ92664 365 aaKnown RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 REPIN1Q9BWE0 567 aaKnown RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 ACTR3CQ9C0K3 210 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 ZDHHC11Q9H8X9 412 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 Q0VFX4 171 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 BAGE3Q86Y29 109 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 BAGE2Q86Y30 109 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 GNG12Q9UBI6 72 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 B4DEV8 164 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 COX5AP20674 150 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 SSTR5P35346 364 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 DAZAP2Q15038 168 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 KIAA1644Q3SXP7 199 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF324BQ6AW86 544 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms