RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 TMEM14EPQ6UXP3 125 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 MBD3L2Q8NHZ7 208 aaPredicted RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 LURAP1Q96LR2 239 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 WDR61Q9GZS3 305 aaKnown RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 UNKLQ9H9P5 680 aaKnown RBP16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 LRRC30A6NM36 301 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 LINC00473A8K010 186 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 RAB5AP20339 215 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 AGAP20933 346 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 CATR1Q13166 79 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 OR8G2PQ6IF36 304 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 ALKBH2Q6NS38 261 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 RAB39BQ96DA2 213 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 GNG13Q9P2W3 67 aa16.31■□□□□ 0.2
CDC42EP1-201ENST00000249014 LOC102723971A0A1B0GUV8 181 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF891A8MT65 544 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 C15orf65H3BRN8 121 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 ST8SIA5O15466 376 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 OR8U8P0C7N1 319 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 SLC38A11Q08AI6 406 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 KHDC3LQ587J8 217 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 LCN15Q6UWW0 184 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZADH2Q8N4Q0 377 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 YPEL4Q96NS1 127 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 CLN8Q9UBY8 286 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 UBE2L5PA0A1B0GUS4 154 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF737O75373 536 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 PRDX2P32119 198 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 FGF8P55075 233 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 SNRPEP62304 92 aaKnown RBP16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 EDDM3AQ14507 147 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 SPRNQ5BIV9 151 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 BEND4Q6ZU67 534 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF429Q86V71 674 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 RCC1LQ96I51 464 aaKnown RBP16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 AGMATQ9BSE5 352 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF665Q9H7R5 613 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 DUSP13Q9UII6 198 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 PSG11Q9UQ72 335 aa16.3■□□□□ 0.2
CDC42EP1-201ENST00000249014 CD55P08174 381 aa16.29■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF83P51522 516 aa16.29■□□□□ 0.2
CDC42EP1-201ENST00000249014 MSMO1Q15800 293 aa16.29■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF787Q6DD87 383 aa16.29■□□□□ 0.2
CDC42EP1-201ENST00000249014 PARD6GQ9BYG4 376 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP1-201ENST00000249014 CADP27708 2225 aa16.29■□□□□ 0.2
CDC42EP1-201ENST00000249014 IGKV1D-17A0A075B6S4 117 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 A0A1W2PPE3 182 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF727A8MUV8 499 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 OR2C1O95371 312 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 PLA2G5P39877 138 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 SERF2P84101 59 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 LTC4SQ16873 150 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 Q3ZCU0 254 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF561Q8N587 486 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 FAM169BQ8N8A8 192 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 MBD3L1Q8WWY6 194 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 TAF15Q92804 592 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF98A6NK75 572 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZFP92A6NM28 416 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 SRRM5B3KS81 715 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 CLDN14O95500 239 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ELLP55199 621 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 PAX5Q02548 391 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 HNF4GQ14541 408 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZNF474Q6S9Z5 364 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZDHHC16Q969W1 377 aa16.28■□□□□ 0.2
CDC42EP1-201ENST00000249014 ZG16O60844 167 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 EIF3GO75821 320 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 DLK1P80370 383 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 ADAM5Q6NVV9 412 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 C1orf174Q8IYL3 243 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 S100PBPQ96BU1 408 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 PLPPR2Q96GM1 343 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 FAM215AQ9Y5M1 114 aa16.27■□□□□ 0.2
CDC42EP1-201ENST00000249014 C5orf52A6NGY3 159 aa16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 PMS2P5A8MQ11 134 aa16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 PROP1O75360 226 aa16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 MAS1LP35410 378 aa16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 TAGLN2P37802 199 aaKnown RBP16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 TMEM41BQ5BJD5 291 aa16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 MUCL1Q96DR8 90 aa16.27■□□□□ 0.19
CDC42EP1-201ENST00000249014 IGHV3OR15-7A0A075B7D8 119 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 M0R1B8 84 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 SPINT2O43291 252 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 IGKV1D-33P01593 117 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 IGKV1-33P01594 117 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 IFNA4P05014 189 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 BCL2P10415 239 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 HTD2P86397 168 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 EIF2S3LQ2VIR3 472 aaKnown RBP16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 ZNF66Q6ZN08 573 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 GCSAMQ8N6F7 178 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 CISD1Q9NZ45 108 aaKnown RBP16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 PCP4L1A6NKN8 68 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 RAB29O14966 203 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 OR2B8PP59922 312 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 MZT1Q08AG7 82 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms