RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 TCTEX1D2Q8WW35 142 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 ADTRPQ96IZ2 230 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 PATZ1Q9HBE1 687 aaKnown RBP11.67□□□□□ -0.54
SDF2-201ENST00000247020 H0YIZ8 118 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 ST8SIA3O43173 380 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 ZNF16P17020 682 aaPredicted RBP11.67□□□□□ -0.54
SDF2-201ENST00000247020 NFYBP25208 207 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 GPR6P46095 362 aaPredicted RBP11.67□□□□□ -0.54
SDF2-201ENST00000247020 AVPI1Q5T686 147 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 WDR25Q64LD2 544 aaPredicted RBP11.67□□□□□ -0.54
SDF2-201ENST00000247020 FAM71F2Q6NXP2 309 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 ZNF767PQ75MW2 155 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 HEXA-AS1Q9H8Q6 139 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 E5RGE8 158 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 K7EPK0 472 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 MMP23AO75900 390 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 MBPP02686 304 aaPredicted RBP11.66□□□□□ -0.54
SDF2-201ENST00000247020 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 CCL3L1P16619 93 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 SSTR2P30874 369 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 LPAR6P43657 344 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 THBS3P49746 956 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 ARHGDIBP52566 201 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 S100A10P60903 97 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 RPL30P62888 115 aaKnown RBP11.66□□□□□ -0.54
SDF2-201ENST00000247020 SPAG16Q8N0X2 631 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 FAM71E2Q8N5Q1 922 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 TNFRSF14Q92956 283 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 RRNAD1Q96FB5 475 aaKnown RBP11.66□□□□□ -0.54
SDF2-201ENST00000247020 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 S1PR3Q99500 378 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 PLEKHA2Q9HB19 425 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 NSG2Q9Y328 171 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
SDF2-201ENST00000247020 hCG_1809904A0A1W2PP81 198 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 A0A1W2PPE2 198 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 A0A1W2PR64 198 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 A0A1W2PRV1 198 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 LINC00473A8K010 186 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 SLC31A2O15432 143 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 PROP1O75360 226 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 PITX3O75364 302 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 LY6HO94772 140 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 MMP9P14780 707 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 NKX2-1P43699 371 aaPredicted RBP11.65□□□□□ -0.54
SDF2-201ENST00000247020 AKR1C2P52895 323 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 SRSF1Q07955 248 aaKnown RBP eCLIP11.65□□□□□ -0.54
SDF2-201ENST00000247020 BTNL3Q6UXE8 466 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 ODF3L1Q8IXM7 274 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 LY6G5BQ8NDX9 201 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 RNASE11Q8TAA1 199 aaKnown RBP11.65□□□□□ -0.54
SDF2-201ENST00000247020 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 MMP24Q9Y5R2 645 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
SDF2-201ENST00000247020 SAA2-SAA4A0A096LPE2 208 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 M0R1X1 148 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 HPRT1P00492 218 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 SAA2P0DJI9 122 aaPredicted RBP11.64□□□□□ -0.55
SDF2-201ENST00000247020 IGHV1-8P0DP01 117 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
SDF2-201ENST00000247020 ID3Q02535 119 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 DDB2Q92466 427 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 ZNF251Q9BRH9 671 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 LSM5Q9Y4Y9 91 aaKnown RBP11.64□□□□□ -0.55
SDF2-201ENST00000247020 USF3Q68DE3 2245 aa11.64□□□□□ -0.55
SDF2-201ENST00000247020 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 BCL2L11O43521 198 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 TSC22D2O75157 780 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 LIPFP07098 398 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 P0C879 139 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 PVALBP20472 110 aaPredicted RBP11.63□□□□□ -0.55
SDF2-201ENST00000247020 BRWD1-AS2P59051 145 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 GNB2P62879 340 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 SLC51BQ86UW2 128 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 LYG1Q8N1E2 194 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 C11orf42Q8N5U0 333 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 OR9G1Q8NH87 305 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 CCL19Q99731 98 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
SDF2-201ENST00000247020 U3KQ87 197 aa11.63□□□□□ -0.55
SDF2-201ENST00000247020 UBR5O95071 2799 aaPredicted RBP11.63□□□□□ -0.55
SDF2-201ENST00000247020 EPG5Q9HCE0 2579 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms