RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 GYPAP02724 150 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 ESDP10768 282 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 PNMTP11086 282 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 CDC34P49427 236 aaPredicted RBP16.91■□□□□ 0.3
HOXC13-201ENST00000243056 KRTDAPP60985 99 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 CXorf66Q5JRM2 361 aaPredicted RBP16.91■□□□□ 0.3
HOXC13-201ENST00000243056 FAM89BQ8N5H3 189 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 ZNF519Q8TB69 540 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 STARD4Q96DR4 205 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 TMED7-TICAM2A0A0A6YYA0 188 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 PHF1O43189 567 aaPredicted RBP16.91■□□□□ 0.3
HOXC13-201ENST00000243056 TSPOP30536 169 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 ARR3P36575 388 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 TMEM144Q7Z5S9 345 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 RNF138Q8WVD3 245 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 TMEM56Q96MV1 263 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 SCNM1Q9BWG6 230 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 TMEM56-RWDD3S4R434 201 aa16.91■□□□□ 0.3
HOXC13-201ENST00000243056 PINLYPA6NC86 204 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 OR6C6A6NF89 314 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 OR5B21A6NL26 309 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 FAHP16930 419 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 PLA2G5P39877 138 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 ZNF814B7Z6K7 855 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 NXPH3O95157 252 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 WNT2P09544 360 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 RFPL3SP0C7P2 107 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 FAM57BQ71RH2 274 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 C1QL2Q7Z5L3 287 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 MYPOPQ86VE0 399 aaPredicted RBP16.9■□□□□ 0.3
HOXC13-201ENST00000243056 OR2M3Q8NG83 312 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 PINX1Q96BK5 328 aaKnown RBP16.9■□□□□ 0.3
HOXC13-201ENST00000243056 KLHL13Q9P2N7 655 aa16.9■□□□□ 0.3
HOXC13-201ENST00000243056 DUXBA0A1W2PPF3 345 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 ZNF737O75373 536 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 ZNF20P17024 532 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 MEF2BQ02080 365 aaPredicted RBP16.89■□□□□ 0.29
HOXC13-201ENST00000243056 FAM180AQ6UWF9 173 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 PBOV1Q9GZY1 135 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 BSNQ9UPA5 3926 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 CTXN2P0C2S0 81 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 LHX2P50458 406 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 CCL11P51671 97 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 RPS20P60866 119 aaKnown RBP16.89■□□□□ 0.29
HOXC13-201ENST00000243056 SNAI3Q3KNW1 292 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 C6orf201Q7Z4U5 140 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 SLAMF6Q96DU3 332 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 FAM103A1Q9BTL3 118 aaKnown RBP16.89■□□□□ 0.29
HOXC13-201ENST00000243056 MEGF9Q9H1U4 602 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 SH2D2AQ9NP31 389 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 ANXA10Q9UJ72 324 aa16.89■□□□□ 0.29
HOXC13-201ENST00000243056 CLDN18P56856 261 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 RPL27P61353 136 aaKnown RBP16.88■□□□□ 0.29
HOXC13-201ENST00000243056 OR51E1Q8TCB6 317 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 DDIT4LQ96D03 193 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 RYDENQ9NUL5 291 aaKnown RBP16.88■□□□□ 0.29
HOXC13-201ENST00000243056 CYB561P49447 251 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 PPP1CBP62140 327 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 PLPPR5Q32ZL2 321 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.88■□□□□ 0.29
HOXC13-201ENST00000243056 GPER1Q99527 375 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 SAMD10Q9BYL1 202 aa16.88■□□□□ 0.29
HOXC13-201ENST00000243056 NCKAP5O14513 1909 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 A0A1W2PNR3 127 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 IFNA1P01562 189 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 BAXQ07812 192 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 ABHD17BQ5VST6 288 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 PRR27Q6MZM9 219 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 UHRF2Q96PU4 802 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 SLC35D1Q9NTN3 355 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 MRPS16Q9Y3D3 137 aaKnown RBP16.87■□□□□ 0.29
HOXC13-201ENST00000243056 IGHV1-69-2A0A0G2JMI3 117 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 IGLC7A0M8Q6 106 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 SERPINE3A8MV23 424 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 HS3ST1O14792 307 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 NEURL1O76050 574 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 ANOS1P23352 680 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 APOBEC3AP31941 199 aaPredicted RBP16.87■□□□□ 0.29
HOXC13-201ENST00000243056 TMEM108Q6UXF1 575 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 ZNF596Q8TC21 504 aa16.87■□□□□ 0.29
HOXC13-201ENST00000243056 ZNF407Q9C0G0 2248 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 ODAMA1E959 279 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 DXOO77932 396 aaKnown RBP16.86■□□□□ 0.29
HOXC13-201ENST00000243056 RRADP55042 308 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 MRPL30Q8TCC3 161 aaKnown RBP16.86■□□□□ 0.29
HOXC13-201ENST00000243056 ZDHHC11Q9H8X9 412 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 K7ERU9 68 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 KLK10O43240 276 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 TLX3O43711 291 aaPredicted RBP16.86■□□□□ 0.29
HOXC13-201ENST00000243056 FMODQ06828 376 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 TESK1Q15569 626 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 DEFB109BQ30KR1 87 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 ZNF286AQ9HBT8 521 aa16.86■□□□□ 0.29
HOXC13-201ENST00000243056 PHF3Q92576 2039 aaKnown RBP16.85■□□□□ 0.29
HOXC13-201ENST00000243056 IGHV2-26A0A0B4J1V2 119 aa16.85■□□□□ 0.29
HOXC13-201ENST00000243056 GOSR1O95249 250 aa16.85■□□□□ 0.29
HOXC13-201ENST00000243056 P04436 131 aa16.85■□□□□ 0.29
HOXC13-201ENST00000243056 ZNF823P16415 610 aa16.85■□□□□ 0.29
HOXC13-201ENST00000243056 PRSS57Q6UWY2 283 aa16.85■□□□□ 0.29
HOXC13-201ENST00000243056 YRDCQ86U90 279 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms