RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 H1FXQ92522 213 aaKnown RBP9.43□□□□□ -0.9
CCDC170-201ENST00000239374 POM121L2Q96KW2 1035 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 NDUFAF3Q9BU61 184 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 hCG_38984A0A1B0GV85 526 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 OOEPA6NGQ2 149 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 COX7A2P2O60397 106 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 CXorf1O96002 111 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 ERHP84090 104 aaKnown RBP9.43□□□□□ -0.9
CCDC170-201ENST00000239374 LRTM2Q8N967 370 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
CCDC170-201ENST00000239374 ZDBF2Q9HCK1 2354 aa9.43□□□□□ -0.9
CCDC170-201ENST00000239374 SYNGR3O43761 229 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF552Q9H707 407 aaPredicted RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 IL36RNQ9UBH0 155 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CLDN16Q9Y5I7 305 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 KIAA2026Q5HYC2 2103 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 A0A1W2PR77 199 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 HELTA6NFD8 242 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 OR2H2O95918 312 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 ID3Q02535 119 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF124Q15973 351 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 STUMQ69YW2 141 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF441Q8N8Z8 693 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 OR2Z1Q8NG97 314 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 LSM10Q969L4 123 aaKnown RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 AKIRIN1Q9H9L7 192 aaPredicted RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 HS3ST3B1Q9Y662 390 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 WIPF3A6NGB9 483 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CYC1P08574 325 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CSRP1P21291 193 aaKnown RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 HERPUD1Q15011 391 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 C11orf42Q8N5U0 333 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 DIDO1Q9BTC0 2240 aaKnown RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CT45A6P0DMU7 189 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CT45A5P0DMU8 189 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CT45A7P0DMV0 189 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 MAGEA5P43359 124 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 JOSD1Q15040 202 aaPredicted RBP9.42□□□□□ -0.9
CCDC170-201ENST00000239374 P2RY6Q15077 328 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CT45A1Q5HYN5 189 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 SMRP1Q8NCR6 262 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 CT45A3Q8NHU0 189 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 LRRC29Q8WV35 223 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 WDR54Q9H977 334 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF581Q9P0T4 197 aa9.42□□□□□ -0.9
CCDC170-201ENST00000239374 LINC00271P0C7V0 271 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 SCCPDHQ8NBX0 429 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF596Q8TC21 504 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 OR2J1Q9GZK6 312 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 CHCHD2Q9Y6H1 151 aaPredicted RBP9.41□□□□□ -0.9
CCDC170-201ENST00000239374 CEACAM18A8MTB9 384 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 SIAH2O43255 324 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 FGF5P12034 268 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 USF1P22415 310 aaPredicted RBP9.41□□□□□ -0.9
CCDC170-201ENST00000239374 BRS3P32247 399 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 ARL3P36405 182 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 CCL11P51671 97 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 SPCS3P61009 180 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 RIPPLY2Q5TAB7 128 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF525Q8N782 197 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 TMEM171Q8WVE6 324 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 ZNF835Q9Y2P0 537 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 IGKV1-12A0A0C4DH73 117 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 IGKV1D-12P01611 117 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 GNG10P50151 68 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
CCDC170-201ENST00000239374 SHANK1Q9Y566 2161 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 M0R2Z0 102 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 CTSSP25774 331 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 MIC13Q5XKP0 118 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 DRAM1Q8N682 238 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 NFAM1Q8NET5 270 aaPredicted RBP9.41□□□□□ -0.9
CCDC170-201ENST00000239374 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 CHRDL1Q9BU40 450 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
CCDC170-201ENST00000239374 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 TCFL5Q9UL49 500 aa9.41□□□□□ -0.9
CCDC170-201ENST00000239374 TRGV5A0A0B4J1U4 118 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 IGHV2-70P01814 119 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 CBLN1P23435 193 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 TIPARPQ7Z3E1 657 aaKnown RBP9.4□□□□□ -0.9
CCDC170-201ENST00000239374 SMOC1Q9H4F8 434 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
CCDC170-201ENST00000239374 BPIFB3P59826 476 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 OR5R1Q8NH85 324 aa9.4□□□□□ -0.9
CCDC170-201ENST00000239374 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms