RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 H3BUA1 57 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 SLC22A1O15245 554 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 TPPPO94811 219 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 MGMTP16455 207 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 IGFBP3P17936 291 aaPredicted RBP6.29□□□□□ -1.4
IFT43-201ENST00000238628 MECP2P51608 486 aaKnown RBP6.29□□□□□ -1.4
IFT43-201ENST00000238628 CD81P60033 236 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 RPS16P62249 146 aaKnown RBP6.29□□□□□ -1.4
IFT43-201ENST00000238628 RPEL1Q2QD12 228 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 C6orf141Q5SZD1 244 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 XAF1Q6GPH4 301 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 JAGN1Q8N5M9 183 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 DEFB125Q8N687 156 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 OR52I1Q8NGK6 324 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 OR2K2Q8NGT1 345 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 GRPEL2Q8TAA5 225 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 IL1F10Q8WWZ1 152 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 CYYR1Q96J86 154 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 NEURL2Q9BR09 285 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 IFI27L2Q9H2X8 130 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 SLC2A8Q9NY64 477 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 SIGLEC8Q9NYZ4 499 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 ABRACLQ9P1F3 81 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 PEMTQ9UBM1 199 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 CKLFQ9UBR5 152 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
IFT43-201ENST00000238628 CRTAPO75718 401 aaPredicted RBP6.28□□□□□ -1.4
IFT43-201ENST00000238628 CD7P09564 240 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 LIMS3P0CW19 117 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 LIMS4P0CW20 117 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 CPEP16870 476 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 GABRB1P18505 474 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 AADACP22760 399 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 HMGN3Q15651 99 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 DMKNQ6E0U4 476 aaPredicted RBP6.28□□□□□ -1.4
IFT43-201ENST00000238628 AWAT2Q6E213 333 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 SIGIRRQ6IA17 410 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 OR5AN1Q8NGI8 311 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 OR13C5Q8NGS8 318 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 GHSRQ92847 366 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 ABHD14BQ96IU4 210 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 OR14A2Q96R54 314 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 TSNAXQ99598 290 aaKnown RBP6.28□□□□□ -1.4
IFT43-201ENST00000238628 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 FAM53CQ9NYF3 392 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
IFT43-201ENST00000238628 RPL36Q9Y3U8 105 aaKnown RBP6.28□□□□□ -1.4
IFT43-201ENST00000238628 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 A0A1W2PPK0 400 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 ZNF785A8K8V0 405 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 OR11H12B2RN74 326 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 OGG1O15527 345 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 AIREO43918 545 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 PDCD6O75340 191 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 OR2A4O95047 310 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 TRBV12-3P01733 135 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 ALPLP05186 524 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 LGALS7P47929 136 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 ALDH3A2P51648 485 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 DEFA5Q01523 94 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 DYRK1AQ13627 763 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.41
IFT43-201ENST00000238628 Q499Y3 187 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 OR2G6Q5TZ20 316 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 C1orf146Q5VVC0 180 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 ZNF343Q6P1L6 599 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 TMPRSS11AQ6ZMR5 421 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 LAX1Q8IWV1 398 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 DRAXINQ8NBI3 349 aaPredicted RBP6.27□□□□□ -1.41
IFT43-201ENST00000238628 BVESQ8NE79 360 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 RHOXF1Q8NHV9 184 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 SETD6Q8TBK2 473 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 SNAPC3Q92966 411 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 USMG5Q96IX5 58 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 Q96M66 194 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 TMEM68Q96MH6 324 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 NEDD4LQ96PU5 975 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 FAAP24Q9BTP7 215 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 TINAGL1Q9GZM7 467 aaPredicted RBP6.27□□□□□ -1.41
IFT43-201ENST00000238628 PARP12Q9H0J9 701 aaKnown RBP6.27□□□□□ -1.41
IFT43-201ENST00000238628 MRPS18AQ9NVS2 196 aaKnown RBP6.27□□□□□ -1.41
IFT43-201ENST00000238628 BABAM2Q9NXR7 383 aa6.27□□□□□ -1.41
IFT43-201ENST00000238628 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
IFT43-201ENST00000238628 TRAV8-7A0A075B6U6 113 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 A0A0B4J203 849 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 TRBV5-5A0A0J9YX44 114 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 EI24O14681 340 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 ITGB1BP1O14713 200 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 SPDEFO95238 335 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 IGKV1-16P04430 117 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 CAPGP40121 348 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 CEACAM6P40199 344 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 ETV1P50549 477 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 GUCA2BQ16661 112 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 YIF1BQ5BJH7 314 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 CDH26Q8IXH8 852 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
IFT43-201ENST00000238628 FAM46BQ96A09 425 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms