RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RND3P61587 244 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 MEF2BQ02080 365 aaPredicted RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 LEAP2Q969E1 77 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 ZFP30Q9Y2G7 519 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 ZXDCQ2QGD7 858 aaPredicted RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 CDX2Q99626 313 aaPredicted RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 PTPRFP10586 1907 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 SSTR5P35346 364 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 DLX1P56177 255 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 C1orf100Q5SVJ3 147 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 FGFRL1Q8N441 504 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 ARL6IP6Q8N6S5 226 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 APOBEC4Q8WW27 367 aaKnown RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 SMDT1Q9H4I9 107 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 KIAA0100Q14667 2235 aaKnown RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 TMEM189A5PLL7 270 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 GREM1O60565 184 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 RECKO95980 971 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 LINC00869P0C866 280 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 UBR3Q6ZT12 1888 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 SDHCQ99643 169 aaPredicted RBP11.52□□□□□ -0.56
NEK4-201ENST00000233027 ZG16O60844 167 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 ADRA2AP08913 450 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 UNC119Q13432 240 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 FHL5Q5TD97 284 aa11.52□□□□□ -0.56
NEK4-201ENST00000233027 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 TGIF1Q15583 401 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 HEXA-AS1Q9H8Q6 139 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 M0R3E3 92 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 GCSHP23434 173 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 FCARP24071 287 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 ZNF362Q5T0B9 420 aaPredicted RBP11.52□□□□□ -0.57
NEK4-201ENST00000233027 UNQ9370/PRO34162Q6UXP9 181 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 ZNF818PQ6ZRF7 136 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 SRXN1Q9BYN0 137 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 NPDC1Q9NQX5 325 aaPredicted RBP11.52□□□□□ -0.57
NEK4-201ENST00000233027 COL4A5P29400 1685 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 C16orf97H3BN30 126 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 VKORC1L1Q8N0U8 176 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 C1RLQ9NZP8 487 aa11.52□□□□□ -0.57
NEK4-201ENST00000233027 KIR2DL2P43627 348 aaPredicted RBP11.51□□□□□ -0.57
NEK4-201ENST00000233027 KLF7O75840 302 aaPredicted RBP11.51□□□□□ -0.57
NEK4-201ENST00000233027 NPBWR2P48146 333 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 COL5A3P25940 1745 aaPredicted RBP11.51□□□□□ -0.57
NEK4-201ENST00000233027 OR8G5Q8NG78 346 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 ZNF502Q8TBZ5 544 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 ITLN1Q8WWA0 313 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 SGK494Q96LW2 274 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 DLL3Q9NYJ7 618 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 APCDD1LQ8NCL9 501 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 CISD1Q9NZ45 108 aaKnown RBP11.51□□□□□ -0.57
NEK4-201ENST00000233027 KNL1Q8NG31 2342 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 H7C2G1 150 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 AREGP15514 252 aa11.51□□□□□ -0.57
NEK4-201ENST00000233027 METTL1Q9UBP6 276 aaKnown RBP11.51□□□□□ -0.57
NEK4-201ENST00000233027 ZP1P60852 638 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 ABLIM2Q6H8Q1 611 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 OR1N2Q8NGR9 330 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
NEK4-201ENST00000233027 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
NEK4-201ENST00000233027 PGPA6NDG6 321 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 H3BTX0 84 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 REG1AP05451 166 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 CSRP3P50461 194 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 TMEM187Q14656 261 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 KIAA1644Q3SXP7 199 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 GRIFINA4D1Z8 144 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 SIAH2O43255 324 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 S1PR2O95136 353 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 AMY1AP04745 511 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 NUBP1P53384 320 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 MS4A5Q9H3V2 200 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 MGST3O14880 152 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 KBTBD11O94819 623 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
NEK4-201ENST00000233027 HOXD4P09016 255 aaPredicted RBP11.49□□□□□ -0.57
NEK4-201ENST00000233027 NAT2P11245 290 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 TFPI2P48307 235 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 C1orf185Q5T7R7 199 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 LINC01590Q5TEZ4 76 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 LINC00518Q8N0U6 118 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 ATOH7Q8N100 152 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 SLC25A33Q9BSK2 321 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 GCGP01275 180 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 THY1P04216 161 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
NEK4-201ENST00000233027 FAM181AQ8N9Y4 354 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 RTN4RQ9BZR6 473 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 KCNMB2Q9Y691 235 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 SOD3P08294 240 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 LRRC75BQ2VPJ9 315 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms